Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq21 95.1 4e-14 >seq21 Length=25602908 Score = 95.1 bits (104), Expect = 4e-14 Identities = 241/359 (67%), Gaps = 11/359 (3%) Strand=Plus/Plus Query 188738 ATGATGGAGTAAAGATCAAAAAATCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTA 188797 |||||| |||| | ||||| |||| || | | |||| || ||||| ||||||| Sbjct 20685187 ATGATGACATAAAACTTGAAAAAAGTAATATTTTGCTGCTTGGACCAACTGGGTCAGGTA 20685246 Query 188798 AAACATTATTTGCTCAAACATTGGCTGATATG-TTACATGTACCTCTAGCTATCTCTGAT 188856 |||| | | || || || || ||| | ||| | |||| ||| | ||||||| ||| Sbjct 20685247 AAACCCTGCTGGCACAGACTTTAGCT-AAATGCCTTGATGTCCCTTTTGCTATCTGTGAC 20685305 Query 188857 GCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGT-ATTGCTTCG 188915 || |||| || | ||||| || |||||||||||| | || || ||||| Sbjct 20685306 TGTACAACTTTGACTCAGGCTGGATACGTAGGTGAAGATATTGAGTCTGTGATTGC-CAA 20685364 Query 188916 TTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGA 188975 | |||||| || |||| || | ||| || ||| |||||||| | | | || Sbjct 20685365 ACTGCTCCAAGATGCCAATTATAATGTAGAAAAGGCACAACAAGGAATTGTCTTTCTGGA 20685424 Query 188976 TGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCA--CATCCATTACCCGAGATGTATCT 189033 |||||||||||| |||| || ||| ||| |||| ||| || |||||| | Sbjct 20685425 TGAAGTAGATAAGATTGGCAGTGTGCCAG---GCATTCATCAGTTA--CGGGATGTAGGT 20685479 Query 189034 GGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTTCC 189092 || ||||| || |||||| |||||||||| | | ||||| ||| | | || ||||| Sbjct 20685480 GGAGAAGGCGTTTAGCAAGGTTTATTAAAACTACTAGAAGGCACAATAGTCAATGTTCC 20685538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591751451228864