Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq278 141 9e-29 seq22 114 1e-20 seq28 111 1e-19 >seq278 Length=1117074 Score = 141 bits (156), Expect = 9e-29 Identities = 727/1135 (64%), Gaps = 57/1135 (5%) Strand=Plus/Minus Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264 ||||||| | ||| ||| |||||||| || || ||| ||| |||||||| || | Sbjct 515961 ATGCCTTCTATGTAGCAGACCTTGGAGATGTTCTGAAGAAACACGGAAGATGGCTAAAAG 515902 Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCAGAACGACGAGAGAG---TCC 20321 || | ||| |||| ||| |||| || || || || ||| |||| | Sbjct 515901 CTCTTCCTTGTGTCACTCCCCTTTATGCAGTCAAATGT---AATGACAGTAGAGCTATTG 515845 Query 20322 TCAAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGT 20381 | ||| |||| ||||| || || |||||||||||||| || ||| || ||||| | Sbjct 515844 TGAAGGCCCTCACTGCCATTGGGACAGGCTTTGACTGTGCTAGCAAGACTGAAATTCAAT 515785 Query 20382 TACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGC 20441 | |||||| ||| | || | |||| ||||| | | ||| ||||||||||| || Sbjct 515784 TG-TGCAAAGTCTCAGGGTGCCTCCAGAGAGGATTATCTATGCAAATCCTTGTAAACAAG 515726 Query 20442 CTTCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAG 20501 || || | | ||| | || | | |||||| | ||||||||||||| ||||||| Sbjct 515725 TGTCTCAAACCAAGTACACTGCCAATAATGGAGTCCAGATGATGACTTTTGACAGTGAAG 515666 Query 20502 AAGAGCTTACCAAAATTGATCGCCTGCACCATG--ATGCTAAGCTGGTACTGAGGATTAA 20559 || | | ||| || || |||| || | || ||| |||| || | ||| Sbjct 515665 TTGAATTGATGAAAGTT--TCCAGAGCAC-ATCCAAAGCCAAGTTGGTTTTGCGAATTGC 515609 Query 20560 AGTGGATGACTCTAACTCAGACAGCATACTGAGTGTCAAGTTTGGGGCTCCTATTGAAGC 20619 ||||| | || ||| | | ||| ||||| || || || || | | || | Sbjct 515608 CACTGATGATCCCAAAGCAGTCTGTCGACTCAGTGTTAAATT-GGTGCCACACTCAAAAC 515550 Query 20620 CAGCCAACGCCTGCTAAAACAGGCCAAAAAATTAGGCCTAGAAGTGATCGGAGTCAGCTT 20679 |||| || || | ||| ||| ||| | || | | || || || |||||||| Sbjct 515549 CAGCAGACTTCTTTTGGAACGGGCAAAAGAGCTAAATATTCATGTCATTGGCGTCAGCTT 515490 Query 20680 CCACGTGGGCAGTGGCTGCAAAGATGCACAG-GCTTACAGAAAAGCCATAGCTGAGGCCA 20738 |||||| || |||||||| | ||| | || |||| | | || || |||| || Sbjct 515489 CCACGTAGGAAGTGGCTGTACTGATCCCAAGAGCTTTGTGCAG-GCAATCTCTGATGCTC 515431 Query 20739 GGAGAGCTTTTGACTTTGGCACGCTGATGG-GCTTTGA-CATGTACCTCTTGGATATTGG 20796 | | | ||| || | || ||||| | | ||| | ||||||||| |||||||||| Sbjct 515430 GCTGTGTCTTTTACATGGGA--GCTGAGGTTGGTTTCAGCATGTACCTGCTGGATATTGG 515373 Query 20797 TGGCGGCTTTCCCGGGATCA-ATGAGATTGAGCCAACTTTTGAGGACATTGCAGAAGTCA 20855 | |||||||| || ||| | || ||| ||| | ||||| || || | | | | Sbjct 515372 CAGTGGCTTTCCTGG-ATCTGAGGATATTAAGCTTAAATTTGAAGAGATCACTGTTATAA 515314 Query 20856 TTAACGCGGCCTTGGAAAGGCATTTTCCAGATGATGCCAACCTGACAATTATTGGTGAAC 20915 | | | | || ||||| | | | |||||| || | ||| ||| || | ||||| Sbjct 515313 TCAGCCCAGCATTGGACAAGTACTTTCCATCAGACTCTGGAGTGAGAATCATAGCTGAAC 515254 Query 20916 CTGGCAGGTACTACGCTACCTCGGCGCTAACTATAGCTGTAACTGTGATTGCTAAAAAGT 20975 | ||||| || || | | | || || | || | || || | | | ||||| ||||| | Sbjct 515253 CAGGCAGATATTATGTTGCATCAGCTTTCACACTTGCAGTTAGTATCATTGCCAAAAAAT 515194 Query 20976 -GTGTTGAAG--ACA------CTCC-----TGGAGATAA------------AAAGTTTAT 21009 || || ||| ||| ||| || |||| | || ||||| Sbjct 515193 TGTATTAAAGGAACAGATAGGCTCTGATGATGCAGATGAGTCCAGTGGACAAACCTTTAT 515134 Query 21010 GTATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCATGCTCG 21069 |||||| || |||||||| || ||||| ||||||||||| | | | | ||||||| Sbjct 515133 GTATTACGTGAATGATGGAGTATATGGATTGTTTAACTGCATCCTTTATGATCATGCTCA 515074 Query 21070 TCCTATGCCTATGCTGCTTAA-AGA--AAAACGCCTTGAAGACAAAGACTATGTTTCTAG 21126 | | |||| | ||| || ||| ||| || || | || | ||| || || Sbjct 515073 TGTAAAGCCTCTTCTGGAAAAGAGACCTAAATCCCCAGATAAGAAGTATTATTCATCCAG 515014 Query 21127 CATTTGGGGGCCTAGCT---GCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCC 21183 ||| ||||| | | | |||||| | || || ||| || || | ||||| ||||| Sbjct 515013 CATATGGGGAACAACATATGATGATGGCCTTGACTGGATTATTGAGTGCTGTGACCTGCC 514954 Query 21184 AGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAG 21243 ||| | || |||||| ||||| | | ||| |||| ||||| ||||||| || | | | Sbjct 514953 AGAAATGCATGTGGGCAACTGGATGCTCTTTAAAAATATGGGTGCTTACA-CTGTGGCTG 514895 Query 21244 CT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGC-ACTATGTTATTTCAG 21296 || |||| || || || || || ||| |||| || | | ||||||| || |||| Sbjct 514894 CTGCTTCCACTTTCAATGGATT-CCAGAGCCCGACTATCTACTATGTGATGTCAG 514841 >seq22 Length=23169006 Score = 114 bits (126), Expect = 1e-20 Identities = 206/300 (69%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 20205 ATGCCTTTTGTGTGATAGATCTTGGAGAAATTGTGCAGAGACATTTTAGATGGCTCAAGG 20264 ||||||| | ||| ||| |||||||| || || ||| ||| |||||||| || | Sbjct 3070380 ATGCCTTCTATGTAGCAGACCTTGGAGATGTTCTGAAGAAACACCGAAGATGGCTAAAAG 3070321 Query 20265 CTTTGCCTAAAGTCATTCCATTTTACGCCGTTAAGGCCCAGAACGACGAGAGAGTCCTC- 20323 || | ||| |||| ||| ||||| || || || || ||| |||| | | Sbjct 3070320 CTCTTCCTCGTGTCACTCCCTTTTATGCAGTCAAATGT---AATGACAGTAGAGCCATTG 3070264 Query 20324 --AAGACCCTAGCTGCCCTTAAAACTGGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGT 20381 |||||||| |||||| || || || ||||| ||||| || ||| || || || | Sbjct 3070263 TGAAGACCCTTGCTGCCATTGGGACAGGATTTGATTGTGCTAGCAAGACTGAAATACAAT 3070204 Query 20382 TACTGCAAAATCTGGGAGTTCACGCAGACAGGATACTTTTTGCGAATCCTTGTAAGCAGC 20441 | |||||| ||| || || | |||| ||||| | | ||| ||||||||||| || Sbjct 3070203 TGGTGCAAAGTCTCGGGGTGCCTCCAGAGAGGATTATCTATGCAAATCCTTGTAAACAAG 3070144 Query 20442 CTTCGCATATAACGTATGCCGCTCAAACTGGAGTAAGGCTGATGACTTTTGATAGTGAAG 20501 || || || | |||||| || | | |||||| | ||||||||||||| ||||||| Sbjct 3070143 TGTCTCAAATTAAGTATGCTGCCAATAATGGAGTCCAGATGATGACTTTTGACAGTGAAG 3070084 >seq28 Length=19772736 Score = 111 bits (122), Expect = 1e-19 Identities = 204/294 (69%), Gaps = 4/294 (1%) Strand=Plus/Plus Query 21005 TTTATGTATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCAT 21064 ||||||||||| || |||||||| || ||||| ||||| ||||| | | | | ||| Sbjct 4199368 TTTATGTATTACGTGAATGATGGAGTATATGGATCGTTTAATTGCATCCTTTATGATCAT 4199427 Query 21065 GCTCGTCCTATGCCTATGCTGCTTAA-AGAAAAACGCCTTGAAGACAAAGACTATGTTTC 21123 |||| | |||| | |||| || ||| | || || || || | ||| || Sbjct 4199428 GCTCACGTAAAGCCTCTTCTGCAAAAGAGACCTAAACC-AGATGAGAAGTATTATTCATC 4199486 Query 21124 TAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCC 21183 ||||| ||||| || | || ||||| | || | || ||| |||||||||| ||||| Sbjct 4199487 CAGCATATGGGGACCAACATGTGATGGTCTTGACCGGATCGTTGAGCGGTGTGACCTGCC 4199546 Query 21184 AGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAG 21243 ||| | || || ||||||||| | | |||||||| ||||| ||||||| || | | | Sbjct 4199547 AGAAATGCATGTAGGCGACTGGATGCTCTTTGAAAATATGGGTGCTTACA-CTGTGGCTG 4199605 Query 21244 CT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCAG 21296 || |||| || || || || |||| | |||| | ||||||| || |||| Sbjct 4199606 CTGCTTCTACTTTCAATGGATTCCAGAGGCCAACTATCTACTATGTGATGTCAG 4199659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463500444864240