Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq6 264 1e-65 seq122 147 3e-30 >seq6 Length=46294980 Score = 264 bits (292), Expect = 1e-65 Identities = 659/990 (67%), Gaps = 17/990 (2%) Strand=Plus/Minus Query 162067 TTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCTCATCGAAC 162126 ||||| | || | ||| || |||||||||| || || ||| ||| || ||| Sbjct 34723810 TTATGCCTCAGGTGCTCATCCAGACACTGGATGGCAAAGTGGTCGACGTCCATGTCAAAC 34723751 Query 162127 TTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGATCCGAAC 162186 || || || |||| ||| |||| || | || |||| || || || || | |||||| Sbjct 34723750 TTATTGGCAAACAAGTGGTGCGTGTGCAGCA---TCCAGTTCAGGTCTCCAGCGCCGAAC 34723694 Query 162187 ACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATCGTCCACA 162246 |||||||| || |||||||| || |||| || || || | || || | | Sbjct 34723693 ACGCACACCGAGCGCACGTGGGTCCCCGTGCAGGGTGGGTAGGGAGCGCCCTTAGAAGTA 34723634 Query 162247 TCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGAGGTGTCG 162306 |||||||| ||||| |||||||| || ||||| | | | |||||||||| |||| Sbjct 34723633 TCCCCCTCATAGTACTGCCACTTGACAAACCTCGCCACCGAGAGCATGTCGGACAAGTCG 34723574 Query 162307 TACTTGTACACTGACGGCACG-GCTCCAGGAACACCCGGCAGTCTCTGTAGAGTAGCCCA 162365 ||||| | || | || || | |||||||| | || | || || | ||| ||||| Sbjct 34723573 TACTTATGG-CTCAAGGAGCGTGAGCCAGGAACTTCAGGGATCCTTTGGATAGTGGCCCA 34723515 Query 162366 CAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGACCGTTTT 162425 || | || || || || ||||| |||| || ||||||||| |||| || ||| Sbjct 34723514 GAGATACTCATCCGGGCTGTACGTGTCCTGCGCCCACTCCATAAACTTTTGGATTTTTTC 34723455 Query 162426 ATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACC--AGAA 162483 || | ||| | ||| | || || ||| | || | ||| || || || || |||| Sbjct 34723454 ATTTTCTAGCACGTACGTCACATATTCCCTACTGACCACAAAATAGGCACTGCCCGAGAA 34723395 Query 162484 AACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCATTCCC 162543 || | | || | | ||||| || ||| | ||||||||| | | |||| Sbjct 34723394 AAGAGGCGTTTCA--AGCGGAGGATGCGTTTTCACGGTCCCCGTGTTGGTCAGCTTTCCG 34723337 Query 162544 TCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGTTCG--G 162601 || | |||| | | | |||| ||||||| | |||| ||| || | | ||| | Sbjct 34723336 TCAATGACCGCATACCGCTTCTTCCACCTCTCT-TCTTTATGG-AGTGGCATCTTCTCCG 34723279 Query 162602 TCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTGGTCT 162661 | || || |||| |||| || | ||| |||| | || || ||||| ||||| | Sbjct 34723278 TTTCAAGGTTGTTCTCACCCATGAACGACTTGAGCTTCCTGACGATTTCTAGGTTGGTTT 34723219 Query 162662 TAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCA--CTTAACGCTGAGTCC 162719 | | |||||| || | ||||| ||||| || | || ||||| || |||| | || Sbjct 34723218 TGATGGGAAAATCCATACCGCAAAGATTTATCAAGTACTTCCAGTCTGCACGC--ATTCT 34723161 Query 162720 GTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGAC 162779 || || |||| | ||||| || || ||||| || || ||||| || || || || || Sbjct 34723160 GTGAAGGTCCTTCATGCAGTTGAGGTCAGCCTGAACCCGGCTCCATGATGCATAAACCAC 34723101 Query 162780 GCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGC 162839 |||||||| | |||| ||||||||||| | |||||| || | || |||||||| || Sbjct 34723100 ACTCTCCAATTGACTGGCCACAAAGACATTATTGAAACAGGATGCAATGCCCATCACCGC 34723041 Query 162840 CAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGC 162899 | ||| | | || | ||| || || || || | ||| || | ||||||||| Sbjct 34723040 AGCTAGGAAGGGCTGCTCTGATTTTCTGTCCACATGGATGCAATAGAAATTCTGAGGCAT 34722981 Query 162900 GTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATA 162959 |||||||||||||| | || |||| ||| || || || || || |||||||||||||| Sbjct 34722980 ATAGATGGCCCTCAGGAGCCTGTCGAGCATTTCGATTTTGTGATGAACCACGATAGAATA 34722921 Query 162960 CGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAGACCCTGTAAAGTACTTGCGGTCCCT 163019 ||||| || ||| | ||||| || || || | | |||| ||| |||||| | | Sbjct 34722920 GGCTATTGGAAACCCCGCCTCTTCTTTGCTAAGGGGTTCCGTAATGTATTTGCGGCTCTT 34722861 Query 163020 CACAAACGCCGCACAGTCCTCCGTCATGTT 163049 | || | || |||||| |||||||| Sbjct 34722860 GATGAAAGAAGCGCAGTCCCTGGTCATGTT 34722831 >seq122 Length=6483299 Score = 147 bits (162), Expect = 3e-30 Identities = 209/294 (71%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830 |||| || || || ||||| | || || ||| | || | ||||| ||||| || | || Sbjct 1888179 CATAAAGGGTGAGGCAGGTTCTTCCTGAAATTATCCCAGCACCAAAGGTATTGAAGAGAC 1888120 Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890 ||| |||| ||||| ||||||| |||||| ||||| || || | || || ||| || Sbjct 1888119 ACAGGTAACACCCTTCATCCTCCAGGGTGGTATTCCAGAAGGTGATGGTTGAGTTTTCGA 1888060 Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950 || | || | || ||| ||| || | || || ||||||||| ||||| || || Sbjct 1888059 GTTCCAGCTCGGTGATGGTCATCCTGCTTTTATAGTAAGGCTGGACTACAACCCCATGTA 1888000 Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010 ||| |||| | ||||||||||| || ||| | ||||| | | || ||||| || || | Sbjct 1887999 TCTTGCTGTAGGTGGCCATGTTGTCTGGGATTATAGCCGTCTTTTTTTGCCAGGTCACAA 1887940 Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCA 172064 | || | ||| | |||| | |||||||||||| |||||||| ||||||| Sbjct 1887939 TCAAGATTTCCTCAGAAGTTTTCACAGAGCATCTTAAGGAAGCAGGAGTGTTCA 1887886 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/227 (70%), Gaps = 11/227 (5%) Strand=Plus/Minus Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562 ||||||| ||| || || ||| |||| | ||| | || | ||| | |||||||| Sbjct 1890684 ACAGTTTCCTTGAACTCAGTCACATTCCCGAGGTGCAGCACCTGGCAGACCACCTCCT-- 1890627 Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622 | ||||| ||| | ||||| ||||| | ||||| | || |||||||| || ||||| Sbjct 1890626 -TCCCCACCTGAGTCTTAGGGTCTTTGATGTGAAGGACACTGGTAACAGACGTCGTCCCA 1890568 Query 171623 TTACGATGT---AGAACGGTTTTAGTACTATTTTCTATTCC-GGATCCGGCAACTTTCCA 171678 || | || ||||| | |||| ||||||| || || || || | || |||||| Sbjct 1890567 TTTGGGTGAGTCAGAACC---TCAGTATTATTTTCAATCCCTGGTTCAAGGAA-TTTCCA 1890512 Query 171679 AAATATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTA 171725 | || ||||| ||||| | ||||| ||||||||||| || |||| Sbjct 1890511 GGAGATCACAGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATATTTA 1890465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578375653492800