Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq46 89.7 5e-13 seq1 86.0 6e-12 seq51 84.2 2e-11 >seq46 Length=13992998 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 || ||||| |||| || | | |||||||||| || ||||||||||| | || || Sbjct 3038125 CAGGCGCAGGACCAGGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCG 3038066 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||| || ||||| || || | | |||| || | ||| || || ||||| || ||||| Sbjct 3038065 ACCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATCCCTTC 3038006 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 |||||| || || |||| | || | || || | |||||||| || | || Sbjct 3038005 TTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGT 3037946 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || |||||||| ||||||| ||| || ||||| Sbjct 3037945 GATGGTCTTGCCAGTCAGGGTTTTTACGAAGATTTGCAT 3037907 >seq1 Length=73491278 Score = 86.0 bits (94), Expect = 6e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 147516 TTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATT 147575 ||| | |||||||||||||||||| ||| ||||| || ||||| |||||||||||||| Sbjct 30997182 TTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGTTGCTTTTCCGATT 30997123 Query 147576 GCACGCGTCTTTGAAGAGCATGTACGG 147602 || | |||||| | |||||||| || Sbjct 30997122 ACAAGAATCTTTGTACAGCATGTATGG 30997096 >seq51 Length=12882142 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||| |||| | |||||||||| || || |||||||| | |||| |||||| Sbjct 9170538 ACCAGGTGTAGGGTTGACTCTTTCTGGATATTGTAGTCAGAAAGAGTACCACCATCTTCA 9170479 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | ||| || || | | |||| || | ||| || || ||||| || ||||||||||| Sbjct 9170478 AACTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATACCTTCTTTATCTTGG 9170419 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | || || | |||||||| || | || | || || Sbjct 9170418 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 9170359 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| |||||||||| || ||||| Sbjct 9170358 CCAGTCAGGCTTTTTATGAAGATTTGCAT 9170330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476564772111480