Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq158 104 2e-17 seq25 98.7 9e-16 seq9 91.5 1e-13 seq212 89.7 5e-13 seq21 89.7 5e-13 seq102 86.0 6e-12 >seq158 Length=4245986 Score = 104 bits (114), Expect = 2e-17 Identities = 158/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || ||||| | ||||||||||| | || || || | ||||| |||| || ||| || Sbjct 3727621 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGAACCC 3727680 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 ||||| || || | || || || || ||||| || || || || || ||| Sbjct 3727681 TCGGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 3727740 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA---TGTCAGCGAT 25348 |||||||||||||||| | ||||| ||||| ||||||| ||| | |||| || Sbjct 3727741 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATG-GAGATACTTTGTC--TGAC 3727797 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||||| |||||||| || ||||| ||||| | ||||||||| Sbjct 3727798 TACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGA 3727839 >seq25 Length=21972308 Score = 98.7 bits (108), Expect = 9e-16 Identities = 157/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | ||||||||||| | || || || | ||||| | || || ||| | Sbjct 20948346 CAAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTTGAGGTTGAACC 20948405 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||||| || || | || || || || ||||| || || || || || || Sbjct 20948406 CTCGGATACGATAGAAAAGGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 20948465 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT-GATAGA-AATGTCAGCGAT 25348 ||||||||||||||||| | ||||| ||||| |||||| || | | |||| || Sbjct 20948466 TCAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTC--TGAC 20948523 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||||| |||||||| || ||||| ||||| | ||||||||| Sbjct 20948524 TACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGA 20948565 >seq9 Length=38779656 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/221 (70%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | || |||||| | ||| |||||| | ||||| || | || ||| | Sbjct 2389281 CAAGATGCAGATTTTCGTAAAACCCTTACAGGGAAAACC-ATCACACTCAAGGTTGAACC 2389223 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | |||| || || | || ||| || || ||||| | || || || || || Sbjct 2389222 CTCAGATATGATAGAAAATGTGAAAGCCAAGATCCAGGATAAGTAAGGAATTCCTCCTGA 2389163 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGA-TGATAGAAATGTCAGCGATT 25349 ||||||||||||||||| | ||||| ||||| ||||| |||| | | | | || | Sbjct 2389162 TCAGCAAAGACTCATTTTTGCTGGCAAGCAACTAGAAGATTGAT-GTACTTTGTCTGACT 2389104 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 |||| |||||||| || ||||| ||||| | ||||||||| Sbjct 2389103 ACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGA 2389063 >seq212 Length=2426081 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/220 (69%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | || |||||||| | || || || | ||||| | || | ||| | Sbjct 1901084 CAAGATGCAGATTTTCGTAAAAACCCTCACGGGGAAGACCATCACTCTTGATGCTGAACC 1901143 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||||| || || | || || || || ||||| || || || || || || Sbjct 1901144 CTCAGATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 1901203 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||||||||||||||||| | ||||| ||||| ||||||| | | | | || || Sbjct 1901204 TCAGCAAAGACTCATTTTTGCAGGCAAGCAACTGGAAGATGGACGTACTTT----GACTA 1901259 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||| |||||||| || ||||| ||||| | ||||||||| Sbjct 1901260 CAACATTCAAAAGGAGTCCACTCTTCATGTTGTGTTAAGA 1901299 >seq21 Length=25602908 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/221 (69%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACA-TTAACCGGAAAATCGATCACGATCGAAGTCGAAG 25229 ||| ||||| | ||||||| ||| ||| || || | ||||| |||| | ||| Sbjct 20609668 CAAGATGCAGATATTTGTAATAACCCTTATGGGGGAAGACCATCACTCTCGAGATTGAAC 20609727 Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 || ||||| || || | || || || || |||||||| || || || || | Sbjct 20609728 CCTTGGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTG 20609787 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 |||||||||||||||||| | ||||| ||||| ||||||| | | ||| || | Sbjct 20609788 ATCAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTGTGTCTGACT 20609847 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 |||| |||||||| || ||||| |||| | || |||||| Sbjct 20609848 ACAACATTCAAAAGGAGTCCACTCTTCACCTTGTATTAAGA 20609888 >seq102 Length=7754592 Score = 86.0 bits (94), Expect = 6e-12 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| |||| ||||||| | | || || | ||||| |||| || || | Sbjct 7635761 CAAGATGCAGATGTTCATAAAAACCCTCATGGGGAAGACCATCACTCTCGAGGTTGACCC 7635820 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | ||||| || || | || || || || ||||| || || || || || || Sbjct 7635821 CTCGGATACAATAGAAAATGTGAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 7635880 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||||||||||||| ||| | ||||| ||||| ||||||| | | | | || || Sbjct 7635881 TCAGCAAAGACTCGTTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 7635940 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 ||| |||||||| || ||||| ||||| | ||||||||| Sbjct 7635941 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAGA 7635980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445051042241760