Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq223 244 1e-59 seq122 197 2e-45 seq170 168 8e-37 seq283 159 4e-34 seq12 154 2e-32 seq55 127 2e-24 seq82 114 2e-20 >seq223 Length=2232465 Score = 244 bits (270), Expect = 1e-59 Identities = 507/750 (68%), Gaps = 6/750 (1%) Strand=Plus/Minus Query 146826 AAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAA--ATCTTGAGCTTG 146883 ||| ||||| || ||||||| || || ||| || ||||| || |||||||| Sbjct 1613111 AAAGTCTTCAGCTTTGAAATCATCAATTGTCTCAACTTT--TCAAAGGATTTTGAGCTTC 1613054 Query 146884 GGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAG 146943 || || |||| || | || |||||||| ||||| ||||||||||| || ||||| Sbjct 1613053 GGAAAAGGTCTTGGTTCTCTCTGAAGCTGAATCTTCAGCGGCTCCACGTGATTCAGGTAA 1612994 Query 146944 ACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCC 147003 | || || || |||| || || |||||||| || ||||| || || || | ||| | Sbjct 1612993 ATATGTGCATCTCCCAAAGTATGTACAAAGTCACCTGGCTTCAGACCAGTGATGTGCGTG 1612934 Query 147004 ACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCC 147063 | | |||| |||||||| ||||||||||| |||||||| || || ||||||||| |||| Sbjct 1612933 ATCTTGTACGTGAGCAGGGAGTAGCTGGCAATGTTGAACGGCACACCCAGGCCCGTGTCT 1612874 Query 147064 CCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGG 147123 || ||| |||||||||||||| | || || |||| ||||||| |||||||| | | Sbjct 1612873 CCTGACTGCTGGTACAGCTGGC-GGTCAGTTCACCGTTCACCACGTAGAACTGGCAGAAG 1612815 Query 147124 ATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACC 147183 |||||||| || || | ||| || || || |||||||| || | | Sbjct 1612814 GCATGGCACGGAGGTAGTGTCATCAGAGGAAGATCTTTTGGGTTCCAAGCACGCATGATG 1612755 Query 147184 AGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACG 147243 | | ||| || ||||| | || || || || || | || |||| || Sbjct 1612754 ATTCTTCTGTCATCAGGGTTGGTTTTGATGGTATCAATCACTTTCTGCAATTGGT-AACT 1612696 Query 147244 CCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGG 147303 || || || || | || | || ||| || ||||| |||||||||||| Sbjct 1612695 CCTTGACCTGAATAATCTGAATCCATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGG 1612636 Query 147304 AAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGA 147363 ||||| || ||| | || | ||| || | ||| | || || ||| | | | | Sbjct 1612635 AAGCCATAAACTAGGCCAAAGTCACCTTCTTCTCTTTTGGATAATCCCAGGCTATCCAAA 1612576 Query 147364 AACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAG 147423 || || || || | ||| |||||||| |||||| |||| || ||||| |||| Sbjct 1612575 AAGTCTCGGTGTCCATTGGCATCCCAGATTTTCACTCCTTTGGAAGATAGCTCTTTAGCT 1612516 Query 147424 TCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTC 147483 | ||||| ||| ||| ||||| |||| |||||||||||| ||| |||| || || | Sbjct 1612515 TTTGTGGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAACACACAT 1612456 Query 147484 TTGGTGGTCAGCAGGGGGAACTGGTCCCTCAGCGAATACCTCGCCTGGTCCCCAAACACA 147543 ||||| |||||||| || || | || || | || | ||||| |||||||| Sbjct 1612455 TTGGTTGTCAGCAGTGGAAATTCATCTTTCCGGCTGTAGCGGGCCTGCATGCCAAACACC 1612396 Query 147544 GACAGCGTGCCCGTGCCCGTCCTGTCCTCC 147573 ||||| ||||| ||| |||| | ||| ||| Sbjct 1612395 GACAGAGTGCCGGTGTCCGTGCGGTCGTCC 1612366 >seq122 Length=6483299 Score = 197 bits (218), Expect = 2e-45 Identities = 234/317 (74%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 ||||||||||||||| | | | | ||||||||| || || ||| | | |||||| || Sbjct 1887858 GTGGTGACCCAGGATAAAACAGAGAGGCTGAACACTCCTGCTTCCTTAAGATGCTCTGTG 1887917 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 | |||||| |||| | ||||||| |||||||| |||| | | | | || ||||| Sbjct 1887918 AAAACTTCTGAGGAAATCTTGATTGTGACCTGGCAAAAAAAGACGGCTATAATCCCAGAC 1887977 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||| || | ||||| || ||||| || |||||||| ||||| || | Sbjct 1887978 AACATGGCCACCTACAGCAAGATACATGGGGTTGTAGTCCAGCCTTACTATAAAAGCAGG 1888037 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 || | ||||||| |||| | |||| |||||||||||||||| || |||||||||||| | Sbjct 1888038 ATGACCATCACCGAGCTGGAACTCGAAAACTCAACCATCACCTTCTGGAATACCACCCTG 1888097 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 ||||| || ||||| ||| || ||||| || |||||||| |||||| ||| || || Sbjct 1888098 GAGGATGAAGGGTGTTACCTGTGTCTCTTCAATACCTTTGGTGCTGGGATAATTTCAGGA 1888157 Query 171372 GTGGCCTGCCTCACCCT 171388 ||||||||||||| Sbjct 1888158 AGAACCTGCCTCACCCT 1888174 >seq170 Length=3845361 Score = 168 bits (186), Expect = 8e-37 Identities = 186/243 (77%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 146908 AGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAG-ACGTGCGCGTCCCCCAGGGTGTG 146966 |||||||| ||||| |||| | ||| || ||| | |||||| || |||| ||| || Sbjct 2788948 AGCTGAATGTTCAGCAGCTCAATGTGATTCAGGAAATACGTGCA--TCTCCCAAGGTATG 2789005 Query 146967 CACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTA 147026 |||||||| || ||||| | || | ||| ||| |||| |||||| ||| |||| Sbjct 2789006 TACAAAGTCACCTGGCTTTGGACCCGCGGAGTGCACCATCATGCAGGTGACCAGGGAGTG 2789065 Query 147027 GCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 |||||| |||||||| | || |||||||||||||| || |||| ||||| ||||||||| Sbjct 2789066 GCTGGCCATGTTGAACCGCACACCCAGGCCCATGTCTCCTGACCACTGGTGCAGCTGGCA 2789125 Query 147087 CGAGAGCTC-CCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCA 147145 | ||||| || ||| ||||| |||||||||| ||| ||||| || |||||||||| Sbjct 2789126 GCACAGCTCACCAGTC-ACCACGAAAAACTGGCAGAGGGCCTGGCATGGAGGCAGCGCCA 2789184 Query 147146 TGG 147148 ||| Sbjct 2789185 TGG 2789187 >seq283 Length=1095284 Score = 159 bits (176), Expect = 4e-34 Identities = 206/278 (74%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGT-TC-CTGGCCAGCTGAATTTTCAGGGGCTCCA 146929 || |||||||| | ||| |||| | | || ||| | ||||||| ||||| ||||| | Sbjct 231018 ATTTTGAGCTTTGAGAAAGGTCTTAGTTCTCTCTGAC--GCTGAATCTTCAGTGGCTCAA 231075 Query 146930 CGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGC 146989 ||| || ||||| | | || || |||| || || |||||||| || ||||| || | Sbjct 231076 TGTGATTCAGGTAAATATATGCATCTCCCAAAGTATGTACAAAGTCACCTGGCTTCAGAC 231135 Query 146990 CGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCC 147049 |||| ||||| | | ||| ||||||||||| |||| ||||| |||||||| || | | Sbjct 231136 CGGTGACGTGTGAGATCATATAGGTGAGCAGGGAGTGACTGGCCATGTTGAATGGCAAGC 231195 Query 147050 CCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC-CCCGTCGGCCACG 147108 ||||||| ||||| || ||| |||||||||||| || || ||||| || ||| || | Sbjct 231196 CCAGGCCTATGTCTCCTGACTGCTGGTACAGCTGACAGGATAGCTCACCAGTC-ACCCTG 231254 Query 147109 TAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 | |||||||| ||| || ||| ||||||||||| Sbjct 231255 AAGAACTGGCAAAGGGCATGATACGAAGGCAGCGCCAT 231292 >seq12 Length=32490354 Score = 154 bits (170), Expect = 2e-32 Identities = 133/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || || || | ||| || | |||||| |||||||| ||||||||||| |||||||| Sbjct 30593169 CTTCAGACCAGTGATGTGCGCGATCATGTACGTGAGCAGGGAGTAGCTGGCGATGTTGAA 30593110 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || ||||| |||||||| || |||| ||||||||||||||| || ||||| |||| Sbjct 30593109 CGGCACACCCAGACCCATGTCTCCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTT 30593050 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| ||| |||||||| || || ||||| Sbjct 30593049 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGTAGTGCCAT 30593005 Score = 84.2 bits (92), Expect = 3e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341 ||| ||||| ||||||||||||||||| || ||||| |||| ||| || | ||| | Sbjct 30589924 GGCTCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCACCTTCTTCTCTTTT 30589865 Query 147342 CGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401 ||||| ||| | | | ||| || ||||||| | ||| |||||||| |||||| Sbjct 30589864 GGAGAATCCCAGGCTATCCAAAAAGTCTCGGGACCCATTGGCATCCCAGATTTTCACTCC 30589805 Query 147402 CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCC 147435 ||||| || || || |||| || || || ||| Sbjct 30589804 CTTGGAAGATAGTTCTTTAGCGTTTGTCGATCCC 30589771 >seq55 Length=12078711 Score = 127 bits (140), Expect = 2e-24 Identities = 128/167 (77%), Gaps = 12/167 (7%) Strand=Plus/Plus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 ||||||| |||||||||| || ||||| |||||||| ||||||||| |||| ||||||| Sbjct 2461460 AGGGTTATCTGGGTTGCCAAGCTTTGTCTGAGATGATCCAGTTTTACCTGGAAGAGGTGA 2461519 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| ||||| ||||| || || | || | ||| || |||||||| |||| Sbjct 2461520 TGCCACAGGCTGAGAACCA---------TGAA---CCAGGCATCAAAGAGCATGTGAACT 2461567 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | || || |||||||| |||| || || ||||||||||||| ||| Sbjct 2461568 CCCTAGGAGAAAAGCTGAAGAATCTCAGGCTGAGGCTGCGGCGCTGT 2461614 Score = 95.1 bits (104), Expect = 1e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||||||||| || ||||| |||||||| ||||||||||| || || || || ||||||| Sbjct 2463797 AGCTTCAAGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTCGACATCTTCATCAACTACA 2463856 Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548 ||||| | |||||||||| || |||| Sbjct 2463857 TAGAAACCTACATGACAAGGAAGATGA 2463883 >seq82 Length=8849790 Score = 114 bits (126), Expect = 2e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 ||||||||| || ||| | |||| || | ||||||| ||| ||| || | |||||||| Sbjct 7389772 GTACTCTCTAGTATTTATCATTGGCCTGGTGGGCAATGTCCTTGTGGTCTTGGTCCTCAT 7389713 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 | ||||| |||||||| | |||||||| ||||| ||| ||||||||||| | ||| Sbjct 7389712 GCAATACAAAAGGCTCAGAAGCATGACCAGCATCTACCTCCTCAACCTGGCCATCTCTGA 7389653 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGAT 8762 |||||| | | ||||| || ||||| ||||| Sbjct 7389652 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGAT 7389620 Score = 109 bits (120), Expect = 6e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 ||| || |||||||| | | || || | ||||||| | ||||||| | |||||| Sbjct 7438374 GTATTCCCTGGTGTTCATCGTGGGCCTCTTGGGCAATGTCATGGTGATAGTGATCCTCAC 7438433 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||| |||| |||||||||||| ||| |||||||| |||| ||||| ||||| || ||| Sbjct 7438434 AAAATACAGGAGGCTCAGGATTTTGAGCAACATCTACCTGCTCAACTTGGCCGTTTCTGA 7438493 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 | |||| | | ||||| || || || |||||||||| Sbjct 7438494 CTTGCTCTTCCTCTTCACTCTTCCATTCTGGATTCACT 7438531 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||||| |||||||| | || || ||| | ||||| ||||| |||| || || ||| Sbjct 7526222 TACTCGCTGGTGTTCATCTTCGGTCTAGTGGGCAACATGCTGGTCGTCCTCGTTCTGATA 7526281 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 || | ||| | |||||||| | |||| |||||| |||| ||||||||||| | ||| Sbjct 7526282 AACTGCAAAAAGCTCAGGAGCCTGACTGACATCTACCTGCTCAACCTGGCCATCTCCGAC 7526341 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 ||||| | || ||||| |||| || ||| ||||| Sbjct 7526342 CTGCTTTTCCTTCTCACCGTCCCTTTCTGGGCTCACT 7526378 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||||| |||||||| | || || || | ||||| ||||| |||| ||||| ||| Sbjct 7542426 TACTCACTGGTGTTCATCTTCGGTCTTGTGGGCAACATGCTGGTCGTCCTCGTCCTGATA 7542485 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 | | ||| | |||||||| | |||| |||||| |||| ||||||||||| | |||| Sbjct 7542486 TACTGCAAAAAGCTCAGGAGCCTGACTGACATCTACCTGCTCAACCTGGCCATCTCTGAC 7542545 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 ||||| | || ||||| |||| || ||| ||||| Sbjct 7542546 CTGCTTTTCCTTCTCACCGTCCCTTTCTGGGCTCACT 7542582 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 9323 TGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGCTGCGTCAACCCCG 9382 ||||| ||||| || |||| | ||| ||||||||| ||| ||||||||||||||||| | Sbjct 7389056 TGGACGTGGCCATCCAGGTGACAGAGGTGATCGCCTACACACACTGCTGCGTCAACCCGG 7388997 Query 9383 TCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412 | |||||||| || || || |||| ||||| Sbjct 7388996 TGATCTACGCCTTCGTTGGGGAAAGGTTCC 7388967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583431160975200