Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq591 179 5e-39 seq174 179 5e-39 seq285 140 5e-27 seq223 134 2e-25 seq29 131 2e-24 seq387 89.7 7e-12 >seq591 Length=18291 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 5717 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 5770 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||| ||| Sbjct 5771 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGGGAGGCGTCCCGC 5830 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | |||||||||||||| ||||||||| Sbjct 5831 CTGGCCCATTACAACAAGCGCTCCACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGC 5890 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 5891 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 5939 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 12575 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 12522 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||| ||| Sbjct 12521 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGGGAGGCGTCCCGC 12462 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | |||||||||||||| ||||||||| Sbjct 12461 CTGGCCCATTACAACAAGCGCTCCACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGC 12402 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 12401 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 12353 >seq174 Length=3635917 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 3301299 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 3301352 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||| ||| Sbjct 3301353 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGGGAGGCGTCCCGC 3301412 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | |||||||||||||| ||||||||| Sbjct 3301413 CTGGCCCATTACAACAAGCGCTCCACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGC 3301472 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 3301473 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 3301521 Score = 123 bits (136), Expect = 4e-22 Identities = 127/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036 |||||||||||||||||||||||||| |||| || || | | || ||| || ||| Sbjct 3367867 ATCATGAACTCGTTTGTCAACGACATCTTCGAACGTATAGCCGGTGAAGCCTCGCGTCTG 3367926 Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096 |||| | |||||| ||| ||| ||| | || ||||||||||| |||||||||||| Sbjct 3367927 GCGCATTACAACAAACGCTCCACCATCACATCTCGGGAGATCCAGACGGCCGTGCGCCTG 3367986 Query 725097 ATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | | || || ||||||| ||||||||| || |||||||||| Sbjct 3367987 CTGTTACCTGGGGAGCTGGCCAAGCACGCCGTGTCGGAGGGCACCA 3368032 >seq285 Length=1077187 Score = 140 bits (154), Expect = 5e-27 Identities = 168/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | |||||||| ||||| |||| | ||||| ||| ||||| Sbjct 882174 TACAAGGTGTTGAAGCAGGTACACCCAGACACCGGTATCTCATCC------AAGGCCATG 882227 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || |||||||||||||| |||| || || | || ||||||| |||| Sbjct 882228 GGCATCATGAATTCCTTTGTCAACGACATCTTCGAGCGTATTGCCAGCGAGGCCTCTCGC 882287 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||||| | || || || |||||| Sbjct 882288 CTGGCGCACTACAACAAGCGCTCCACCATCACGTCCCGCGAGGTGCAAACGGCTGTGCGC 882347 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | ||| || || |||| |||||| || || ||||| |||| Sbjct 882348 CTGCTGCTTCCCGGGGAGCTAGCCAAGCACGCTGTGTCTGAGGGTACCA 882396 Score = 131 bits (144), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||| || |||| | ||| ||| |||| ||||| Sbjct 890868 TACAAGGTGCTGAAGCAGGTGCATCCAGACACCGGT-----ATC-TCCTCCAAGGCCATG 890815 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| || || | | ||||||| |||| Sbjct 890814 GGCATCATGAACTCCTTTGTCAACGACATTTTCGAGCGTATTGCTAGCGAGGCCTCTCGC 890755 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| || || | |||||| | ||||| || |||||| Sbjct 890754 CTGGCTCACTACAACAAGCGCTCGACCATTACGTCCCGCGAGGTGCAGACGGCAGTGCGC 890695 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | | | ||| || |||||| |||||| || || || || |||| Sbjct 890694 TTGCTGCTTCCCGGGGAGTTGGCCAAGCACGCTGTGTCTGAAGGTACCA 890646 >seq223 Length=2232465 Score = 134 bits (148), Expect = 2e-25 Identities = 170/230 (74%), Gaps = 8/230 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATC-CTCCAACAAGTCCAT 724972 ||||| ||||| |||||||| ||||| |||| |||| || | | ||| |||| Sbjct 1542667 TACAAAGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATCTCTTCTA-AAG-CCAT 1542615 Query 724973 GTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCG 725032 | |||||||| ||||||||||||||||| | || ||||||| |||||| ||| Sbjct 1542614 GGGCATCATGAATTCGTTTGTCAACGACATTTTTGAGCGCATCGCAGGCGAGGCATCTCG 1542555 Query 725033 CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 ||||||| | |||||||||| || || | | || |||||||||||||||||||| Sbjct 1542554 TCTGGCGCATTACAACAAGCGCTCGACCATTACCTCCCGGGAGATCCAGACCGCCGTGCG 1542495 Query 725093 CCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||| | ||| || || || |||| ||| || || ||||| ||||||| Sbjct 1542494 CCTGCTGCTGCCGGGAGAGCTAGCCAAGCATGCTGTATCCGAAGGCACCA 1542445 Score = 104 bits (114), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| || || || ||| || || || | | ||| Sbjct 1564114 TACAAGGTGCTAAAGCAGGTCCATCCGGACAC---TGGTATTTCTTCTAA---GGCTATG 1564061 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||||||||| | || ||||| | || || ||| Sbjct 1564060 GGCATCATGAATTCCTTCGTCAACGACATTTTTGAGCGCATTGCGGGTGAAGCTTCTCGT 1564001 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | ||||||||| || ||| | | ||||||||||| ||||| ||| Sbjct 1564000 CTGGCCCATTACAACAAGCGTTCGACCATCACTTCCAGGGAGATCCAGACTGCCGTCCGC 1563941 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||||||| |||||| ||||||||| || |||||||||| Sbjct 1563940 CTGCTGCTGCCCGGCGAATTGGCCAAGCACGCCGTGTCGGAGGGCACCA 1563892 Score = 104 bits (114), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | || ||||| || ||| |||| || | || | |||| ||||| Sbjct 1572312 TACAAGGTGTTGAAACAGGTCCATCCCGACACCG----GCATTTCTTC--CAAGGCCATG 1572365 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || || |||||||| |||| || || | |||||| ||| Sbjct 1572366 GGCATCATGAATTCCTTCGTTAACGACATCTTCGAGCGAATTGCAGGTGAGGCCTCTCGT 1572425 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||||| | ||| || || || ||| | | ||||| ||||||||||||||| Sbjct 1572426 TTGGCGCATTACAATAAACGTTCGACCATCACTTCCAGGGAGATTCAGACCGCCGTGCGC 1572485 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| ||| |||||| |||||| || ||||||||||||| Sbjct 1572486 CTCCTGCTGCCCGGAGAATTGGCCAAGCACGCGGTGTCCGAGGGCACCA 1572534 Score = 104 bits (114), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 || |||||||| |||||||| ||||| |||| |||| ||| |||| ||||| Sbjct 2058646 TATAAGGTGCTGAAGCAGGTCCACCCAGATACCGG-----CATC-TCCTCCAAGGCCATG 2058699 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| ||||| ||||||||||| | || ||||||| ||||| |||| Sbjct 2058700 GGCATCATGAATTCGTTCGTCAACGACATCTTTGAGCGCATCGCGGGTGAGGCTTCTCGC 2058759 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 | || | | ||| || ||| ||||| | | ||||| ||||| || || ||| Sbjct 2058760 TTAGCCCATTACAATAAACGCTCGACGATTACTTCCAGGGAGATTCAGACGGCGGTCCGC 2058819 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | || || ||||||| |||||||| ||||||||||||| Sbjct 2058820 CTGCTGCTTCCTGGAGAGCTGGCCAAACACGCCGTGTCCGAGGGCACCA 2058868 >seq29 Length=19069880 Score = 131 bits (144), Expect = 2e-24 Identities = 166/227 (73%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | |||||||| ||||| |||| |||| || |||| | ||| Sbjct 18446949 TACAAGGTGTTGAAGCAGGTCCACCCTGACACCGG-----CATC-TCATCCAAGGCTATG 18446896 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 || ||||| || || |||||||| || |||| ||||| | |||||| |||| Sbjct 18446895 GGAATTATGAATTCCTTCGTCAACGATATCTTCGAGCGCATTGCGGGTGAGGCCTCTCGC 18446836 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| ||| ||| | | | ||||||||||| ||||| ||| Sbjct 18446835 CTGGCGCATTACAACAAGCGCTCCACCATCACCTCCAGAGAGATCCAGACTGCCGTCCGC 18446776 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| || |||||||||| |||||| || ||||||||||| Sbjct 18446775 CTGCTGTTGCCTGGGGAACTGGCCAAGCACGCAGTGTCCGAGGGCAC 18446729 Score = 118 bits (130), Expect = 2e-20 Identities = 163/227 (72%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| || ||| |||| | ||| ||| ||| | ||| Sbjct 18476486 TACAAGGTGCTGAAGCAGGTTCATCCCGACACCGGT-----ATC-TCCTCTAAGGCAATG 18476539 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || |||||||| || |||| ||||| | ||||| |||| Sbjct 18476540 GGCATCATGAATTCCTTCGTCAACGATATCTTCGAGCGCATTGCGGGTGAGGCTTCTCGC 18476599 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | | |||||||||| ||| ||| | | | ||||||||||| ||||| || Sbjct 18476600 CTGGCACATTACAACAAGCGCTCCACCATCACCTCCAGAGAGATCCAGACTGCCGTTCGT 18476659 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| ||| || ||||||| |||||| || || || ||||| Sbjct 18476660 CTGTTGTTGCCCGGGGAGCTGGCCAAGCACGCGGTATCTGAAGGCAC 18476706 >seq387 Length=187825 Score = 89.7 bits (98), Expect = 7e-12 Identities = 158/229 (69%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| | | |||| ||| |||| ||||| Sbjct 48244 TACAAGGTGCTGAAGCAGGTCCACCCATATATCAG-----CATC-TCCTCCAAGGCCATG 48297 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||| || || ||||||||||| | || ||||||| ||| | |||| Sbjct 48298 GGCATCATGAAATCATTCGTCAACGACATCTTTGAGCGCATCGCAGGTGAGACTTCTCGC 48357 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 | || | | |||||| || || || | | | ||||| ||||| ||||| || Sbjct 48358 TTAGCCCATTACAACAAATGCTCGACTATTACCTCCAGGGAGATTCAGACGGCCGTCTGC 48417 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | | | || || ||||||| ||||||||| || |||||||||| Sbjct 48418 CTGCTGCTTCTGGGAGAGCTGGCCAAGCACGCCGTTTCTGAGGGCACCA 48466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177059550826466