Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq25 98.7 9e-16 seq158 93.3 4e-14 seq46 93.3 4e-14 seq102 86.0 6e-12 seq67 86.0 6e-12 seq65 82.4 7e-11 >seq25 Length=21972308 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || ||||| | ||| | || |||||||||||||||||| || | | Sbjct 20948576 CCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 20948517 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || ||||| ||||| || ||||| || | | ||||| || | |||| Sbjct 20948516 AAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGA 20948457 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||||| || | | ||| || | ||| ||| Sbjct 20948456 ATTCCTTCCTTATCCTGGATCTTGGCCTTCACCTTTTCTATCGTATCCGAGGGTTCAACC 20948397 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | ||||| ||||| |||||||| Sbjct 20948396 TCAAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 20948350 >seq158 Length=4245986 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||| | || ||||| | ||| | || |||||||||||||||||| || | | Sbjct 3727850 CCACCACAAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 3727791 Query 35570 AAGGT-TCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628 || || || | | || ||||| ||||| || ||||| || | | ||||| || | ||| Sbjct 3727790 AAAGTATCTC-CATCTTCCAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGG 3727732 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 || | ||||| ||| |||||| ||||| | || | | || || | ||| || Sbjct 3727731 AATTCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCTATTGTATCCGAGGGTTCAAC 3727672 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || || || | ||||| ||||| |||||||| Sbjct 3727671 CTCGAGAGTGATGGTCTTCCCTGTGAGGGTTTTTACAAAAATCTGCAT 3727624 >seq46 Length=13992998 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 3038098 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAA 3038039 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||| | | || || ||| |||||| ||||| | | Sbjct 3038038 GATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCTTTATCCTGGATCTTGGCCTTCACATT 3037979 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| ||||| || Sbjct 3037978 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTAC 3037919 Query 35725 AAATATCTGCATTCTG 35740 || || |||||| || Sbjct 3037918 GAAGATTTGCATTTTG 3037903 >seq102 Length=7754592 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | || ||||| | ||| | || |||||||||||||||||| || | | Sbjct 7635991 CCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 7635932 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| | | | ||||| || | |||| Sbjct 7635931 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAACGAGTCTTTGCTGATCAGGAGGA 7635872 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||||| | || | | || || | || ||| Sbjct 7635871 ATTCCTTCCTTATCCTGGATCTTGACCTTCACATTTTCTATTGTATCCGAGGGGTCAACC 7635812 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||| | | ||||| | || |||||||| Sbjct 7635811 TCGAGAGTGATGGTCTTCCCCATGAGGGTTTTTATGAACATCTGCAT 7635765 >seq67 Length=10508679 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 35504 TTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563 ||| | |||||||| | || ||||| ||| | || |||||||||||||||| | Sbjct 1873714 TTAATACCACCACGGAGTCTTAACACACGATGAAGCGCGGACTCCTTTTGAATGTTGCAG 1873655 Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623 || | ||| || || | || ||||| ||||| || |||| || || | ||||| || Sbjct 1873654 TCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAACAATGAATCTTTGCTGATCA 1873595 Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT 35683 | ||||| | ||| ||||| |||||| |||| | || | | | || ||| Sbjct 1873594 GGAGGAATTCCTTCCCTGTCCTGGATCTTGGCCTTCCCATTTTCTCTCATATCTGAGGAT 1873535 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 || ||||| | |||||| || || ||||| | ||||| ||| Sbjct 1873534 TCAACCTCGAGCGTGATGGTCTTCCCCGTAAGGGTTTTTACA 1873493 >seq65 Length=11138919 Score = 82.4 bits (90), Expect = 7e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35544 TCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAA 35603 ||||||||||||||| ||| || | ||| || | || ||||| ||||| || |||| Sbjct 6551982 TCTCCTTTTGAATGTGGTAGTCAGACAAAGTATATCCATCTTCCAGTTGCTTGCCAGCAA 6551923 Query 35604 ATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG 35663 | || | | ||||| || | ||||| || ||||| ||| |||||| ||||| | Sbjct 6551922 AAATGAGTCCTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACAT 6551863 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || | ||| ||||| | ||||| || || | ||| | ||||| | Sbjct 6551862 TTTCTATTGTATCTGAGGGTTCAACCTCGAGAGTGATGGTCTTCCTCGTGAGGGTTTTTA 6551803 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 6551802 CGAAAATCTGCAT 6551790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450749687068440