Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq126 352 4e-92 seq118 275 9e-69 seq22 132 7e-26 seq4 120 4e-22 seq1 114 2e-20 >seq126 Length=6050536 Score = 352 bits (390), Expect = 4e-92 Identities = 648/944 (69%), Gaps = 18/944 (2%) Strand=Plus/Plus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326 |||| |||||| |||| || | |||| ||| ||| | | |||||| |||||||| Sbjct 4678229 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 4678288 Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 | || |||| || || | ||||| || || ||||| || || |||| ||| |||| | Sbjct 4678289 TCTGATATTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCGTCCAGTGAAATATCCT 4678348 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446 |||| || ||||||||||| | | | | || | || || | ||| || | Sbjct 4678349 CCATAAAGTCAAACGGATTTTCTACTCTGAAAACCTTGTGGAAACCCAGTTCCAGCATAA 4678408 Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506 | | || || || || || |||| ||||| | | | | ||| || ||||| | Sbjct 4678409 GTGTGTCCGCCACCAACTCAATGTCCTGCTTCATTAATGTGTAGTCCATCCCAATGAGCT 4678468 Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTT-ATTATC 39565 | | || | ||||| || || ||||| | | | | | ||| | ||| | ||||| Sbjct 4678469 TCCCAGGCAAGGCCTCAGTGAGGAACTCCTGTCCTA-GCCTAACAGCACTGGTCATTATT 4678527 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 | ||||| || || |||| || | ||||| | ||| | ||||| ||| Sbjct 4678528 TCTTTTACTCTCTGCTCCGACGGTTTGTGTCCCAGGTGTTTGAGCATCAGTCAGGCAAAG 4678587 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685 ||||| |||| ||||||||||| ||||| | ||| || ||||||||| | |||||||| Sbjct 4678588 TCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGG-CCAGGCATC 4678646 Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745 || || || || |||||||| ||||| | |||||||| |||||||| ||||| ||||| Sbjct 4678647 AGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGATTCCTTCC 4678706 Query 39746 ACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTTC 39802 ||||||||||| || |||| | ||||| || | | || || | ||||| | Sbjct 4678707 ACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGC 4678766 Query 39803 TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAA 39862 |||| | | || |||||||| |||||| ||||| |||| |||||||| |||||| | Sbjct 4678767 AAGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTGAAGAGAAAT 4678826 Query 39863 TGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGG 39922 | |||| | |||||||| || || || || | |||||||||||||| ||||| Sbjct 4678827 TCCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGA 4678886 Query 39923 ATGTTTTCAATCGCCATCT-GAAAT--------CCGTAAAAACATCTTGCTTCAGTAATT 39973 |||||||| || || || | | ||| | || ||||| | || || ||||| Sbjct 4678887 ATGTTTTCCATGGCAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCCTCTGTAATC 4678946 Query 39974 TGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCA 40033 || || ||| | ||||| |||| |||| |||||||| ||||| |||||||| || || Sbjct 4678947 TGAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCG 4679006 Query 40034 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCA 40093 ||||| |||| |||||| || || ||| | || | ||| |||| | ||||| Sbjct 4679007 AAAAAAGCCAGAACATGTGATATGAAGTATCTCTCTTTGGGCTTCAAGGTTGCCCAGTGC 4679066 Query 40094 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTG 40153 | || || || || | ||| || || ||||| ||||| || ||| |||| || || || Sbjct 4679067 TGAATGTCCTTAGAAAGATCCACCTCCTCAGCCGTCCACAAAGACACCTCCGCTTTCTTA 4679126 Query 40154 TACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 ||||| | ||| || ||| | |||| || ||||| || ||||| Sbjct 4679127 TACATTTGCCAAATGTCATGGTATTCGATAGGAAAGATGACAAA 4679170 >seq118 Length=6727830 Score = 275 bits (304), Expect = 9e-69 Identities = 586/871 (67%), Gaps = 28/871 (3%) Strand=Plus/Plus Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 |||||| || || | |||||| || ||||| ||||| |||| ||| || |||||||| Sbjct 3435600 TTGGTACTCTGAAATTCATTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTC 3435659 Query 39388 CATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAA 39447 ||| |||||||| ||||| ||| | | ||| ||||| | |||| || || Sbjct 3435660 CATAAAATCAAAGGGATTTTCTGCCTGGAAAACCTTTGAGAATCCAAGTTCTACAAGTAA 3435719 Query 39448 TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 39507 ||| | || ||||| || | || | |||||| |||||||||||| | ||| Sbjct 3435720 TCTGTTAGCCACAAACTCAGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGAC 3435779 Query 39508 AACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGA 39567 |||||||| ||| || |||| |||||| | || || | || ||||| | || ||| Sbjct 3435780 AACTGGTAAAGCTTCTGTTAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTC 3435839 Query 39568 TGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTC 39627 | ||| ||| || || || | || | | ||| || | | | || ||||| Sbjct 3435840 CCTGACTCTCTCTTCTGAAGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTC 3435899 Query 39628 ACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAG 39687 ||| || || || |||||||| || || | ||| || ||||| |||||||||| ||| || Sbjct 3435900 ACAGTGCAGACCTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAG 3435959 Query 39688 ACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTAC 39747 | | | ||| || ||| | ||||| |||||||||||||| || ||||| || | |||||| Sbjct 3435960 AACTCTCTTCTTTAGCTAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTAC 3436019 Query 39748 TGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG-TATCAT-TATG-TATCCACTTCTG 39804 || ||||| || || | ||| || || || | | | | || | || |||||| | Sbjct 3436020 AGCAGCAAAGGCCACCACTCTTTCCCCCAAAGTAGATTTTATATCTGCTATCCATCACAA 3436079 Query 39805 TGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATG 39864 | |||||| ||||| |||| ||||| ||||||||||| || ||||||| | | ||| Sbjct 3436080 GGTCCAATCTGCTTTTTTCTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATC 3436139 Query 39865 TTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGAT 39924 ||| | ||| | | || || ||| ||| || ||| ||||| ||||| || | Sbjct 3436140 CCTTTTCTTGGGATC--TGATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAA- 3436196 Query 39925 GTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGA 39984 || || | || | ||| || || | || | || || ||||| Sbjct 3436197 -----CATTCTCGATGAG-AATTTGTGAA---------CCTCTGGAACCTGCACCTCCTG 3436241 Query 39985 ACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAA 40044 || | | ||| |||||||| | ||||||||||| || |||||||| || || Sbjct 3436242 AC-------TGACACCACGTTTTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTAA 3436294 Query 40045 TACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTT 40104 | || | ||||||| ||||| | | | | || ||||||| | || |||||| Sbjct 3436295 AATGTGAGAGACCCAATATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTT 3436354 Query 40105 TGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCA 40164 ||||| || || ||||| |||||||| || || || | | ||| |||||| | ||||| Sbjct 3436355 TGATAAGTCAACCTCTTCTGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCCA 3436414 Query 40165 TATATCACGATATTGTATTGGAAAAATAACA 40195 ||||| | || || |||| ||| || ||| Sbjct 3436415 AGTATCAGGGTACTGGATTGCAAAGATGACA 3436445 >seq22 Length=23169006 Score = 132 bits (146), Expect = 7e-26 Identities = 105/126 (83%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| ||||| | ||| || ||||||||||| |||||||| || || || || | Sbjct 2785906 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2785847 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||| | |||||||| |||||||||||||| ||||| ||||| ||||| | Sbjct 2785846 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGG 2785787 Query 39759 CAACAA 39764 | |||| Sbjct 2785786 CTACAA 2785781 >seq4 Length=47749213 Score = 120 bits (132), Expect = 4e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| ||||| |||||||| ||||| | ||| || Sbjct 24674282 TCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCTTT 24674223 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| || Sbjct 24674222 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 24674163 Query 39761 ACAAGTCTCTCTCC 39774 || | ||| || || Sbjct 24674162 ACCACTCTTTCCCC 24674149 >seq1 Length=73491278 Score = 114 bits (126), Expect = 2e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393 |||| |||| ||| |||||||| ||||| || || || | || || || ||||| | | Sbjct 30965877 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAAGA 30965818 Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453 | ||||||||||| || | ||||| | || || ||| |||| ||||| || ||||||| Sbjct 30965817 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 30965758 Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||||| || || || || |||||| ||||| || |||||||||| Sbjct 30965757 GTTCTACCGTGGTGACCCCACTATATAAGCCTTGGATTACTTTCATGG 30965710 Score = 109 bits (120), Expect = 8e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || || ||||| ||||| || || || |||||||| ||||| | ||| Sbjct 31005461 TGAAATTCTCCTGACAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAT 31005402 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 |||||||| ||||| || ||||| ||||| || || ||||| || || | | |||||| Sbjct 31005401 TCATTATTCCCCAGGATCTGAGCGGTTGAAGCTGTAGGCATTGGGGCAATAAGTAAACTG 31005342 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 31005341 TTTCTTATACCAT 31005329 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || ||||| || | || ||||| || ||||| ||||| | |||||||| || || Sbjct 30976463 GTGCCAGCATTGAAGAGAGTGGGAGAAGCATGAGTAAACCACCTCTCAGAAAGAAGGTTA 30976404 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 ||||||||||| || | || || || || ||||| |||| | ||| | ||||||| Sbjct 30976403 TATGTTTCAATTGCAGCATCAATGTCTTCTTGGTGAATCCCTACAGAGACCCTCATCAAC 30976344 Query 70111 ATATGCTGAGGTCGTTC 70127 |||||||| |||| ||| Sbjct 30976343 ATATGCTGCGGTCTTTC 30976327 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| ||||||||||| || | || || || |||| | | | Sbjct 30995008 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 30994949 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| |||||||| | || || | |||||| || Sbjct 30994948 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTGCATGCCAAGGC 30994889 Query 69715 TC 69716 || Sbjct 30994888 TC 30994887 Score = 86.0 bits (94), Expect = 9e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||||||| || ||||| ||||||||||| ||||||| |||||||||||||||||||| Sbjct 30995560 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 30995501 Query 69567 CATCAATGACCA 69578 ||| || ||||| Sbjct 30995500 CATTAAAGACCA 30995489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686841886496520