Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq126 264 9e-66 seq118 241 1e-58 seq223 203 3e-47 seq22 109 4e-19 seq28 91.5 1e-13 seq11 91.5 1e-13 seq12 89.7 4e-13 >seq126 Length=6050536 Score = 264 bits (292), Expect = 9e-66 Identities = 638/951 (67%), Gaps = 31/951 (3%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 |||||| | ||||| || |||| |||||||| ||||||||||| || ||||| ||| | Sbjct 4679170 TTTGTCATCTTTCCTATCGAATACCATGACATTTGGCAAATGTATAAGAAAGCGGAGGTG 4679111 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTGCAT 43817 || || ||||| || || || || ||| | |||| ||| | ||||| ||| | | Sbjct 4679110 TCTTTGTGGACGGCTGAGGAGGTGGATCTTTCTAAGGACATTCAGCAC--TGGGCAACCT 4679053 Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877 | || || |||| | | | || ||||| ||| |||| ||||| || || || || | Sbjct 4679052 TGAAGCCCAAAGAGAGATACTTCATATCACATGTTCTGGCTTTTTTCGCAGCAAGTGATG 4678993 Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCA 43936 | ||||| |||||||| ||||| || ||| ||||||||||| |||| |||| || Sbjct 4678992 GCATAGTAAATGAAAACTTGGTGGAACGATTTAGCCAAGAAGTTCAGATTA-CAGAGGCC 4678934 Query 43937 CGATGTTTTTATGG---------GTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987 || ||||| ||| | | ||||||||||| ||||| |||||||| |||||| Sbjct 4678933 CGTTGTTTCTATAGCCATAGAAATTGCCAAATTGCCATGGAAAACATTCATTCTGAAATG 4678874 Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAAT 44047 || ||||| || || || || ||||| |||||| || || | | | | || ||| Sbjct 4678873 TATAGTCTCCTTATTGACACTTACATTAAAGATTCCCAAGAAAGGGAATTTCTCTTCAAT 4678814 Query 44048 GCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTT-AAATGGAT--- 44103 || || |||| | | | | | || | || |||| ||||| |||| ||||| Sbjct 4678813 GCTATTGAAATAATGCTTTGTGTCAAGAAGAAGGCAG-CTGGGGCCTTGCGTTGGATTGG 4678755 Query 44104 AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163 | | | | | | | ||||||||| |||| || ||||||| |||||||| || || Sbjct 4678754 GGACAAAGAGGCTACCTATGGAGAACGTGTTGTAGCCTTTGCAGCAGTGGAAGGAATCTT 4678695 Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223 ||||| || || ||||| | ||||| ||| | ||||||||||| |||||||| || Sbjct 4678694 TTTTTCTGGTTCTTTTGCCTCAATATTCTGGCTCAAGAAACGAGGACTGATGCCT-GGCC 4678636 Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 || ||||| ||||| | || || | ||||| || ||||| || || ||||| || | Sbjct 4678635 CACATTTTCCAATGAACTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGACT 4678576 Query 44284 GTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGT 44343 | | || | | || ||| || || || || ||| | | | ||| | | || Sbjct 4678575 GATGCTCAAACACCTGGGACAC---AAACCGTCGGAGCAGAGAGTAAAAGA-AATAATGA 4678520 Query 44344 AGAG-GCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAG 44402 || || || | | ||| ||| || || | || || || |||| || | || | Sbjct 4678519 CCAGTGCTGTTAGGCTAGGACAGGAGTTCCTCACTGAGGCCTTGCCTGGGAAGCTCATTG 4678460 Query 44403 GAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGA-TCGTTTACTTTTG 44461 | ||| | | || ||||| || | ||||| | | || || | ||| | || Sbjct 4678459 GGATGGACTACACATTAATGAAGCAGGACATTGAGTTGGTGGCGGACACACTTA-TGCTG 4678401 Query 44462 GAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATT 44521 |||||||||| | | || | | ||| |||| |||||||| |||||||| ||||| Sbjct 4678400 GAACTGGGTTTCCACAAGGTTTTCAGAGTAGAAAATCCGTTTGACTTTATGGAGGATATT 4678341 Query 44522 TCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGC 44581 || |||| || || || ||||| ||||| || | || || |||||||| | ||||| Sbjct 4678340 TCACTGGACGGAAAGACTAACTTCTTTGAGAAGAGAGTAGGCAAATATCAGAGGATGGGA 4678281 Query 44582 GTCATGATAA---CAAGTGACAATAAATTTACTACGGATGAAGATTTCTAA 44629 || ||| || ||| || ||| ||||| ||||| || |||||| Sbjct 4678280 GTGATGTCAAGTCCAACAGAGAATTCTTTTACCTTGGATGCTGACTTCTAA 4678230 >seq118 Length=6727830 Score = 241 bits (266), Expect = 1e-58 Identities = 572/858 (67%), Gaps = 35/858 (4%) Strand=Plus/Minus Query 43702 TGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTC 43761 |||| | ||| |||| || || | ||| | ||| ||| |||||| | | ||| || || Sbjct 3436445 TGTCATCTTTGCAATCCAGTACCCTGATACTTGGAAAACATACAAACAGGAACAAGCATC 3436386 Query 43762 ATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAA 43821 || |||||||||||||| ||||| || | ||||| | | || |||| | || Sbjct 3436385 CTTCTGGACAGCAGAAGAGGTTGACTTATCAAAAGATCTCCCTCACTGGAACAAGCTTAA 3436326 Query 43822 ACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGAT 43881 | || | || ||| ||| | ||| |||| || |||||||| || || || || || Sbjct 3436325 ATCAGATGAGAAATATTGGGTCTCTCACATTTTAGCCTTTTTTGCAGCCAGTGATGGAAT 3436266 Query 43882 AGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATG 43941 | |||||||| |||| ||| || || || || || | ||||| | Sbjct 3436265 TATAAATGAAAACGTGGT--GTCAGT-----CAGGAGGTGCAGGTTCCAGAGG------- 3436220 Query 43942 TTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGAT 44001 || | |||||| ||| || ||| |||| || || ||||||||| | || | Sbjct 3436219 --TTCA-------CAAATTCTCATCGAGAATGTTCACTCAGAGATGTACAGTTTGCTAAC 3436169 Query 44002 AGATACGTACATCAAAGATGGGCACGAGAAGC-ATCGATTGTTTAATGCGATAGAAACAG 44060 ||| || ||||||| ||| || || ||| || || ||||||| ||| |||||| Sbjct 3436168 AGACACTTACATCA--GATCC-CAAGAAAAGGGATTTTTTATTTAATGTGATTGAAACAA 3436112 Query 44061 TACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAA---ATTCAAATGAT 44116 | || || | | | | | |||||||| ||| || | ||||||| || ||| | Sbjct 3436111 TGCCATGTGTTCAGAAA-AAAGCAGATTGGACCTTGTGATGGATAGCAGATATAAAATCT 3436053 Query 44117 TCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCG 44176 |||| || ||| || | || || ||||| | ||| ||| | |||||||| |||||||| Sbjct 3436052 ACTTTGGGGGAAAGAGTGGTGGCCTTTGCTGCTGTAGAAAGAATTTTCTTCTCAGGATCT 3435993 Query 44177 TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAAT 44236 ||||| || ||||| | | ||||||| ||| | | ||| |||| | || ||||| ||| Sbjct 3435992 TTTGCTGCTATATTCTAGCTAAAGAAGAGAGTTCTTATGTCTGGACTCACTTTTTCCAAT 3435933 Query 44237 GAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATAT 44296 || | || || | |||||||| | || || || ||||||| | || || || |||| Sbjct 3435932 GAACTTATCAGCAGAGATGAAGGTCTGCACTGTGACTTTGCTTACCTGATATTTTGATAC 3435873 Query 44297 CTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAG 44356 | | | | |||||||||| ||| | | | || || || | ||||| || || Sbjct 3435872 TTCGTAAA---TAAGCCTTCAGAAGAGAGAGTCAGGGAGATCATTATTGAGGCTGTCAAA 3435816 Query 44357 ATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTT 44416 || || || || ||| | ||| ||| ||||| || | | ||||||||| || Sbjct 3435815 ATTGAGCAGGAGTTTTTAACAGAAGCTTTACCAGTTGTCCTCGTTGGAATGAATTGTATT 3435756 Query 44417 TTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGAT 44476 ||||||| || |||| ||| | | || | | |||||| | ||||| || | | Sbjct 3435755 TTGATGACACAGTATACTGAGTTTGTGGCTAACAGATTACTTGTAGAACTTGGATTCTCA 3435696 Query 44477 AAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAA 44536 || | | | |||| || ||||||||||||||||||||||| ||| |||| ||| Sbjct 3435695 AAGGTTTTCCAGGCAGAAAATCCCTTTGATTTTATGGAAAATATTTCTTTGCAAGGAAAA 3435636 Query 44537 ACAAACTTTTTTGAAAAA 44554 || || || ||||| ||| Sbjct 3435635 ACGAATTTCTTTGAGAAA 3435618 >seq223 Length=2232465 Score = 203 bits (224), Expect = 3e-47 Identities = 428/631 (68%), Gaps = 12/631 (2%) Strand=Plus/Plus Query 40692 TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGG 40751 ||||| |||| || || ||| |||| ||||| || || || || || | ||| Sbjct 1612436 TTTCCACTGCTGACAACCAAATGTGTGTTCTGGAAGGGTGTTTTGGAGGAGTTGCTGTGG 1612495 Query 40752 TTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAAT 40811 |||||||| || | || || ||||| | |||| | ||||||| | || ||| || Sbjct 1612496 TTTATCAAGGGATCCACAAAAGCTAAAGAGCTATCTTCCAAAGGAGTGAAAATCTGGGAT 1612555 Query 40812 GC----GCACAGTTCTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGG 40867 || | ||| | | || | |||| |||| | |||||| | || || ||||| Sbjct 1612556 GCCAATGGACA---CCGAGACTT-TTTGGATAGCCTGGGATTATCCAAAAGAGAAGAAGG 1612611 Query 40868 TGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTAT 40927 ||| |||| | |||||||| || |||| | | |||||||||||| |||| | ||| Sbjct 1612612 TGACTTTGGCCTAGTTTATGGCTTCCAGTGGAGGCATTTTGGAGCAGAATACAAAGATAT 1612671 Query 40928 GTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGATTAA 40987 | | || |||||| | | ||||| | | ||||| ||| || || ||||| || || Sbjct 1612672 GGATTCAGATTATTCAGGTCAAGGAGTT-ACCAATTGCAGAAAGTGATTGATACCATCAA 1612730 Query 40988 ATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTT 41047 | || | || ||| | || | || || || | || |||||||||| || | | | | Sbjct 1612731 AACCAACCCTGATGACAGAAGAATCATCATGCGTGCTTGGAACCCAAAAGATCTTCCTCT 1612790 Query 41048 GATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTC 41107 |||| || | || || || ||| || || ||||| ||||| || ||||||||| | Sbjct 1612791 GATGACACTACCTCCGTGCCATGCCTTCTGCCAGTTCTACGTGGTGAACGGTGAACTGAC 1612850 Query 41108 ATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAG 41167 | || |||| || ||||| |||| ||| || || || ||||| ||||| || || Sbjct 1612851 C-GCCAGCTGTACCAGCAGTCAGGAGACACGGGCCTGGGTGTGCCGTTCAACATTGCCAG 1612909 Query 41168 TTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGT 41227 || | ||||||||||| | ||| | ||| | || | | || || ||||| ||||| Sbjct 1612910 CTACTCCCTGCTCACGTACAAGATCACGCACATCACTGGTCTGAAGCCAGGTGACTTTGT 1612969 Query 41228 TCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGCCGTTAACAGA-ACAAC 41286 || || || ||||||| |||||||||| | |||||| | |||||| | | ||| || | Sbjct 1612970 ACATACTTTGGGAGATGCACATATTTACCTGAATCACGTGGAGCCGCTGA-AGATTCAGC 1613028 Query 41287 TGACACGAAAACCTAGACCATTTCCAACGCT 41317 | || |||| ||||| ||||| | ||| Sbjct 1613029 TTCAGAGAGAACCAAGACCTTTTCCGAAGCT 1613059 >seq22 Length=23169006 Score = 109 bits (120), Expect = 4e-19 Identities = 91/109 (83%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 43913 CAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971 ||||||||||| |||| |||| || || ||||| ||||| || ||||||||||| ||||| Sbjct 2782724 CAAGAAGTTCAGATTA-CAGAGGCCCGTTGTTTCTATGGCTTCCAAATTGCCATGGAAAA 2782782 Query 43972 TATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 |||||||| |||||||| ||||| || || || || ||||| |||||| Sbjct 2782783 CATTCATTCTGAAATGTATAGTCTCCTTATTGACACTTACATTAAAGAT 2782831 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 |||||||| |||| || ||||| | |||||||| || |||||||| || || ||||| Sbjct 2785771 GGAGAACGTGTTGTAGCCTTTGCGGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCA 2785830 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | ||||| ||| | ||||||||||| |||||||||| | || ||||| ||||| | Sbjct 2785831 TCAATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTT 2785890 Query 44243 ATAAGTCGTGATGA 44256 || || | ||||| Sbjct 2785891 ATTAGCAGAGATGA 2785904 >seq28 Length=19772736 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 47222 CAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGACAATGCA 47281 || ||| ||||| | ||| | ||| | || ||| | ||||||| | || || |||||| Sbjct 8596381 CAGTTTCTAGGATTATATAAGAAAACTGGCAAATTGGTATTTCTTAGATTGGATAATGCA 8596322 Query 47282 GGAAAAACGGCATTACTCCACATGCTCAAATACAATTGCATGAAAGAG-CATAACCCTAC 47340 | |||||| |||| || |||||||| ||| | || || | ||| ||| || Sbjct 8596321 GAAAAAACACCATTGCTACACATGCTAAAAGAA----GCCAGACTCGGACATTTCCCAAC 8596266 Query 47341 ATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCACATTTGATTT 47400 ||||||||| || || ||| |||| || | |||||||| || |||| || || ||| | Sbjct 8596265 ATTACATCCCACTTCGGAAGAACTGACCA-GGCTGGCATGACTTTTACAACTTTCGATCT 8596207 Query 47401 AGGAGGACACATTCA 47415 ||| |||||| |||| Sbjct 8596206 AGGGGGACACGTTCA 8596192 >seq11 Length=36342412 Score = 91.5 bits (100), Expect = 1e-13 Identities = 132/185 (71%), Gaps = 1/185 (1%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 |||||| | ||||| || |||| |||||||| ||||||||||| || ||||| ||||| Sbjct 29862474 TTTGTCATCTTTCCTATCGAATACCATGACATTTGGCAAATGTATAAGAAAGCGGAGGCG 29862533 Query 43760 TCATTTTGGACAGCAGAAGAAGT-TGATTTGACTAAAGACTTAGCACATTGGATTGCATT 43818 || |||||||| || || || || ||| | |||| ||| | | || ||| | || Sbjct 29862534 TCTTTTTGGACGGCTGAGGAGGTGGGATCTTTCTAAGGACATTGAGCACTGGGAAACCTT 29862593 Query 43819 AAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGG 43878 || || |||| | | | || ||||| ||| |||| ||||| || || || || || Sbjct 29862594 GAATCCTGAAGAGAGATACTTCATATCACATGTTCTGGCTTTTTTCGCAGCAAGTGATGG 29862653 Query 43879 GATAG 43883 |||| Sbjct 29862654 CATAG 29862658 >seq12 Length=32490354 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 |||||||| | || || || ||| | || ||||| ||||| || ||||| |||| Sbjct 30593003 TGATGGCACTACCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAACGGTGAGCTGT 30593062 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || |||| || | ||||| |||||||| || || || ||||| ||||| || | Sbjct 30593063 CCTGCCAGCTGTACCAGCGGTCAGGAGACATGGGTCTGGGTGTGCCGTTCAACATCGCCA 30593122 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 | || | ||||||||||| ||||| || ||| Sbjct 30593123 GCTACTCCCTGCTCACGTACATGATCGCGCAC 30593154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397418250746965