Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq223 168 5e-37 seq12 93.3 3e-14 >seq223 Length=2232465 Score = 168 bits (186), Expect = 5e-37 Identities = 489/739 (66%), Gaps = 23/739 (3%) Strand=Plus/Minus Query 111563 AAATAGCAACATCCATCTTTATAGCAGGATGAGGTCTATAATTCTCCAAT-TCAAAGTCA 111621 ||||||| | ||||| || || | ||||| | | ||| || |||| | |||||| Sbjct 1613163 AAATAGCCATTTCCATTTTAATGGTTGGATGCTGATTGTAAC-CTTCAATCTTAAAGTCT 1613105 Query 111622 TCAGCAACAAAATCGTCAATGCAAGCAACTCTTCGTTTAATTTTTAGTTTTGGAAAGGGG 111681 ||||| ||||| ||||| ||||| ||| ||||| || || ||||| || Sbjct 1613104 TCAGCTTTGAAATCATCAATTGTCTCAACTTTTCAAAGGATTTTGAGCTTCGGAAAAGGT 1613045 Query 111682 GTAGGCTTTCGGGTAAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCA 111741 | || | || |||||| | | | |||| | |||||| | |||| ||| ||| Sbjct 1613044 CTTGGTTCTCTCTGAAGCTGAATCTTCAGCGGCTCCACGTGATTCAGGTAAATATGTGCA 1612985 Query 111742 TCTCCTATACAATGGATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTAT 111801 ||||| | | ||| | || || | |||| || |||||||||||| | ||| |||| Sbjct 1612984 TCTCCCAAAGTATGTACAAAGTCACCTGGCTTCAGACCAGTGATGTGCGTGATCTTGTAC 1612925 Query 111802 GTGAGTAGACTGTAACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTT 111861 ||||| || ||| || |||||||| || |||||||| |||||| | ||||| || Sbjct 1612924 GTGAGCAGGGAGTAGCTGGCAATGTTGAACGGCACACCCAGGCCCGTGTCTCCTGACTGC 1612865 Query 111862 TGATATAGCTGACATGATAGTTTATTTTGTGACACATAAAATTGACAAAGTACATGACAA 111921 || || ||||| | | |||| | | ||| || || || || | |||| || Sbjct 1612864 TGGTACAGCTGGCG-GTCAGTTCACCGTTCACCACGTAGAACTGGCAGAAGGCATGGCAC 1612806 Query 111922 GGAGGCAATGCCATCCCATTCATAAA----GGGTCCCCATGCACACATGATCATCCTTCT 111977 ||||| | || |||| | | | |||| || | |||| |||||| || ||||| Sbjct 1612805 GGAGGTAGTGTCATCAGAGGAAGATCTTTTGGGTTCCAA-GCACGCATGATGATTCTTCT 1612747 Query 111978 GCTGTAGCGATTATGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTATCCCTTTACC 112037 | | | || || ||| | || || ||| | |||| ||| || ||| Sbjct 1612746 GTCATCAGGGTTGGTTTTGATGGTATCAATCACTTTCTGCAATTGGTAACTCC-TTGACC 1612688 Query 112038 AGTATAATCCGCCTGACATCCAG-----TGTATGTTGCCCCATAGTGTCTCCATTGGAAT 112092 | |||||| ||| ||||| ||||| ||| ||| | || ||||| ||||| Sbjct 1612687 TGAATAATC----TGA-ATCCATATCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAG 1612633 Query 112093 CCATAAA-TAGGCCCCAGATCTCCCGGGGCTGTATCTGGA-AATTGCTCTCTATTCAACA 112150 ||||||| |||||| || || || || | | |||| ||| | |||| ||| | Sbjct 1612632 CCATAAACTAGGCCAAAG-TCACCTTCTTCTCTTT-TGGATAATCCCAGGCTATCCAAAA 1612575 Query 112151 AATCACTTCTAATATGAGGATTCCAAATCTTCACTCCTTTAGATGATAACTCTCTTGCAT 112210 | || | || | || ||| || ||||||||||| || |||| |||| | || | Sbjct 1612574 AGTCTCGGTGTCCATTGGCATCCCAGATTTTCACTCCTTTGGAAGATAGCTCTTTAGCTT 1612515 Query 112211 TTGTGGATCCTCTAATAAACCATAGCAATTCTTCCACAACCCCTTTCCAGTACACTCTTT 112270 |||||||||| | |||||||| ||||| || |||| ||| || |||||| |||| | || Sbjct 1612514 TTGTGGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAACACACATT 1612455 Query 112271 TAGTAGTTAGCAGTGGaaa 112289 | || || ||||||||||| Sbjct 1612454 TGGTTGTCAGCAGTGGAAA 1612436 >seq12 Length=32490354 Score = 93.3 bits (102), Expect = 3e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 111771 CTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAA 111830 || || |||||||||||| || |||||||| ||||| || ||| || || ||||| || Sbjct 30593169 CTTCAGACCAGTGATGTGCGCGATCATGTACGTGAGCAGGGAGTAGCTGGCGATGTTGAA 30593110 Query 111831 TGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTG 111890 |||||||| || ||||| ||||| || | || || ||||| || || || | | | Sbjct 30593109 CGGCACACCCAGACCCATGTCTCCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTT 30593050 Query 111891 TGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||| || || || || || |||| || ||||| | ||||||| Sbjct 30593049 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGTAGTGCCATC 30593004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391908374109259