Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq96 91.5 9e-14 seq63 82.4 5e-11 >seq96 Length=8018273 Score = 91.5 bits (100), Expect = 9e-14 Identities = 164/236 (69%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| | ||| | ||||| || || || || || || ||||| |||||||| Sbjct 7716932 GCCACCTCTCACACGAAGCACCAGGTGCAGGGTAGACTATTTCTGGATGTTGTAATCTGA 7716991 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | || || || ||||| || |||||||| | |||||| ||||| || || Sbjct 7716992 AAGAGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGTGG 7717051 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC------TTCGC 34651 | |||||||| ||| ||| ||| | ||| || | ||| ||||| |||| Sbjct 7717052 AATGCCCTCCTTATCTTGGAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCGA 7717110 Query 34652 TCTC-CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || || | ||| || || || || | | || |||||||| |||||||| Sbjct 7717111 CCTCGGACCTCAAGGGTAATAGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 7717166 >seq63 Length=11284890 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| | ||| ||||| | ||||| || | || ||| || |||||||| |||||||| Sbjct 6709679 GCCACTTCTCAGACGAAGCACCAGGTGCTGGGTAAACTCTTTCTGAATGTTGTAATCTGA 6709620 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || | | | || ||||||||||| |||||||| | || ||| ||||| || Sbjct 6709619 AAGAGTGTGGCCATACTCGAGTTGTTTACCTGCAAATATCAGACACTGCTGGTCATATGG 6709560 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||| ||| ||| ||| | ||| || | || ||||| | ||| | Sbjct 6709559 AATGCCCTCCTTATCTTGGAT-TTTGGCTTTGACATTCTTGATGGTGTCACTGGGCTCAA 6709501 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | | || || || || || | || |||||||| |||||||| Sbjct 6709500 CCTCAAGGCAGATGGTCTTGCCTGTCAGGGTGTTCACAAAGATCTGCAT 6709452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314699707867769