Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq96 118 9e-22 seq25 107 2e-18 seq158 95.1 1e-14 seq46 93.3 4e-14 seq212 91.5 1e-13 seq65 86.0 5e-12 seq63 86.0 5e-12 seq21 84.2 2e-11 seq99 82.4 7e-11 >seq96 Length=8018273 Score = 118 bits (130), Expect = 9e-22 Identities = 168/237 (71%), Gaps = 7/237 (3%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTG-------GA 27040 |||||||| ||||| || || |||| |||||| ||||||| ||||| || || Sbjct 7717166 ATGCAGATCTTTGTGAAGACCCTGATGGGCAAGACTATTACCCTTGAGGTCCGAGGTCGA 7717107 Query 27041 ACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACC 27100 ||| ||| | ||||||| |||||| ||||| ||||| || || ||||| ||||| Sbjct 7717106 ACCCAGTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGCATTCCACC 7717047 Query 27101 CGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGA 27160 || || |||||| | |||| || |||||||| | || || | || |||| || Sbjct 7717046 TGACCAGCAGCGTCTGATATTTGCAGGCAAACAGCTCGAGGATGGCCGCACTCTTTCAGA 7716987 Query 27161 TTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||| || || |||| ||| | || |||| | ||| || | |||||||| Sbjct 7716986 TTACAACATCCAGAAATAGTCTACCCTGCACCTGGTGCTTCGTGTGAGAGGTGGCAT 7716930 >seq25 Length=21972308 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||||||||| || || || ||| | || |||||||| || ||||| || Sbjct 20948350 ATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTTGAGGTTGAACCCTCG 20948409 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | ||| || || || || || || ||||| || || || ||||| Sbjct 20948410 GATACGATAGAAAAGGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 20948469 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| ||| ||||||| | || | || || |||||| Sbjct 20948470 CAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAAC 20948529 Query 27168 ATTCAAAAGGAGTCGAC 27184 |||||||||||||| || Sbjct 20948530 ATTCAAAAGGAGTCCAC 20948546 >seq158 Length=4245986 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||||||||| || || || ||| | || ||||| || || ||||| || Sbjct 3727624 ATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 3727683 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || || || || ||||| || || || ||||| Sbjct 3727684 GATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 3727743 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| ||| ||||||| | || | || || |||||| Sbjct 3727744 CAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGAGATACTTTGTCTGACTACAAC 3727803 Query 27168 ATTCAAAAGGAGTCGAC 27184 |||||||||||||| || Sbjct 3727804 ATTCAAAAGGAGTCCAC 3727820 >seq46 Length=13992998 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| || || |||||||||||| | || || | || ||||| || ||| | ||| Sbjct 3038391 TTTGTGAAGACCCTGACCGGCAAGACCATCACCTTGGAGGTGGAGCCCAGTGACACCATT 3038450 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 |||| || || || || ||||| |||||||| || || ||||| || ||| | | Sbjct 3038451 GAGAATGTGAAGGCCAAGATCCAAGATAAAGAAGGTATCCCTCCCGACCAGCAGAGGCTC 3038510 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || ||||| || | ||||| || || |||| || ||||| || || || Sbjct 3038511 ATCTTTGCTGGCAAGCAGCTTGAAGATGGTCGTACTCTTTCTGACTACAATATCCAGAAA 3038570 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||| ||| | || |||| | ||| || |||||||| Sbjct 3038571 GAGTCAACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 3038609 >seq212 Length=2426081 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/229 (70%), Gaps = 7/229 (3%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || || ||| | || |||||||| | ||||| || Sbjct 1901088 ATGCAGATTTTCGTAAAAACCCTCACGGGGAAGACCATCACTCTTGATGCTGAACCCTCA 1901147 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | || || || || || || || ||||| || || || ||||| Sbjct 1901148 GATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 1901207 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| ||| ||||||| | || ||| || |||||| Sbjct 1901208 CAAAGACTCATTTTTGCAGGCAAGCAACTGGAAGATGGACGTAC--TTT--GACTACAAC 1901263 Query 27168 ATTCAAAAGGAGTCGACCTTACAT-TTG-GTTTTGCGTTTGCGG-GGTG 27213 |||||||||||||| || | ||| ||| ||| | ||||||| |||| Sbjct 1901264 ATTCAAAAGGAGTCCACTCTTCATGTTGTGTTAAGACTTTGCGGTGGTG 1901312 >seq65 Length=11138919 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || | ||| | || ||||| || || ||||| || Sbjct 6551790 ATGCAGATTTTCGTAAAAACCCTCACGAGGAAGACCATCACTCTCGAGGTTGAACCCTCA 6551849 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || || || || |||||||| || || ||||| Sbjct 6551850 GATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAG 6551909 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| ||| ||||||| | | || | || || ||| || Sbjct 6551910 CAAGGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGATATACTTTGTCTGACTACCAC 6551969 Query 27168 ATTCAAAAGGAG 27179 |||||||||||| Sbjct 6551970 ATTCAAAAGGAG 6551981 >seq63 Length=11284890 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| |||||| | || ||||| || || || Sbjct 6709452 ATGCAGATCTTTGTGAACACCCTGACAGGCAAGACCATCTGCCTTGAGGTTGAGCCCAGT 6709511 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || ||| |||||| ||||| ||||| || || ||||| ||| || || Sbjct 6709512 GACACCATCAAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGCATTCCATATGACCAG 6709571 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| || | |||| || || |||||| | || | | || |||| ||||||||| Sbjct 6709572 CAGTGTCTGATATTTGCAGGTAAACAACTCGAGTATGGCCACACTCTTTCAGATTACAAC 6709631 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || |||| ||| || |||| | ||| || | ||||||| Sbjct 6709632 ATTCAGAAAGAGTTTACCCAGCACCTGGTGCTTCGTCTGAGAAGTGGCAT 6709681 >seq21 Length=25602908 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGC-AAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||||||| ||| || | || ||| | || ||||| || | ||||| | Sbjct 20609672 ATGCAGATATTTGTAATAACCCTTATGGGGGAAGACCATCACTCTCGAGATTGAACCCTT 20609731 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | || || || || || || |||||||| || || || ||||| Sbjct 20609732 GGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGATCA 20609791 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || | | || | || ||||| ||| ||||||| | || || || || ||||| Sbjct 20609792 GCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTGTGTCTGACTACAA 20609851 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||||||||||||||| || Sbjct 20609852 CATTCAAAAGGAGTCCAC 20609869 >seq99 Length=7922563 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||||||| | || || || || || || || Sbjct 5181762 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 5181703 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| ||| || |||||||| |||||||| || || || || Sbjct 5181702 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAG 5181643 Query 27108 CAG 27110 ||| Sbjct 5181642 CAG 5181640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434876033511360