Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq96 91.5 1e-13 seq46 87.8 2e-12 >seq96 Length=8018273 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/237 (69%), Gaps = 7/237 (3%) Strand=Plus/Plus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||| ||||| | || | ||||| || || || || ||| || || || ||||| | Sbjct 7716932 GCCACCTCTCACACGAAGCACCAGGTGCAGGGTAGACTATTTCTGGATGTTGTAATCTGA 7716991 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 ||| || || | || || ||||||||||| |||||||| |||||||||||||| | || Sbjct 7716992 AAGAGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGTGG 7717051 Query 39177 CACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC-----GCTCGA- 39230 | || ||| || || |||||| ||||| || | | || || | |||| Sbjct 7717052 AATGCCCTCCTTATCTTGGATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTCGAC 7717111 Query 39231 CTC-CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 ||| || || | || ||| | || ||| |||| || || |||||||| ||||||| Sbjct 7717112 CTCGGACCTCAAGGGTAATAGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCATCT 7717168 >seq46 Length=13992998 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 |||||| || || || || || | ||| || || | || || ||||| ||||| ||||| Sbjct 3038098 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAA 3038039 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || | ||||||||||| || | | ||||| ||| ||| || || | | Sbjct 3038038 GATGAGCCTCTGCTGGTCGGGAGGGATCCCTTCTTTATCCTGGATCTTGGCCTTCACATT 3037979 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || || || | |||||| |||| ||||| | || || ||||| ||||| || Sbjct 3037978 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTAC 3037919 Query 39273 AAAGATTTGCATCTTTAC 39290 ||||||||||| || || Sbjct 3037918 GAAGATTTGCATTTTGAC 3037901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429504802967009