Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq212 118 7e-22 seq102 118 7e-22 seq158 114 9e-21 seq25 114 9e-21 seq65 95.1 8e-15 seq9 93.3 3e-14 seq94 91.5 1e-13 seq21 89.7 3e-13 seq99 86.0 4e-12 >seq212 Length=2426081 Score = 118 bits (130), Expect = 7e-22 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| |||||||||||||| || || |||||||| || | ||| || Sbjct 1901085 AAGATGCAGATTTTCGTAAAAACCCTCACGGGGAAGACCATCACTCTTGATGCTGAACCC 1901144 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | |||| | || || || || || ||||| | || || ||| Sbjct 1901145 TCAGATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1901204 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 1901205 CAGCAAAGACTCATTTTTGCAGGCAAGCAACTGGAAGATGGACGTACTTT----GACTAC 1901260 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || ||||| Sbjct 1901261 AACATTCAAAAGGAGTCCACTCTTCATGTTGTGTTAAG 1901298 >seq102 Length=7754592 Score = 118 bits (130), Expect = 7e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||| | |||||||||| ||| || || ||||||||||| |||||| || Sbjct 7635762 AAGATGCAGATGTTCATAAAAACCCTCATGGGGAAGACCATCACTCTCGAGGTTGACCCC 7635821 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| | || || || || || ||||| | || || ||| Sbjct 7635822 TCGGATACAATAGAAAATGTGAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 7635881 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | | ||||| ||||| ||||||||||| | ||| ||||| || ||| Sbjct 7635882 CAGCAAAGACTCGTTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 7635941 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || ||||| Sbjct 7635942 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAG 7635979 >seq158 Length=4245986 Score = 114 bits (126), Expect = 9e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || ||||||||||| || || || ||||||||||| ||||| || Sbjct 3727621 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTCGAGGTTGAACCC 3727680 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| | || || || || || ||||| | || || ||| Sbjct 3727681 TCGGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 3727740 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | | ||||| || ||| Sbjct 3727741 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGAGATACTTTGTCTGACTAC 3727800 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || ||||| Sbjct 3727801 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAG 3727838 >seq25 Length=21972308 Score = 114 bits (126), Expect = 9e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || ||||||||||| || || || |||||||| || ||||| || Sbjct 20948347 AAGATGCAGATTTTTGTAAAAACCCTCACAGGGAAGACCATCACTCTTGAGGTTGAACCC 20948406 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| | || || || || || ||||| | || || ||| Sbjct 20948407 TCGGATACGATAGAAAAGGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 20948466 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | || ||||| || ||| Sbjct 20948467 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTAC 20948526 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || ||||| Sbjct 20948527 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAG 20948564 >seq65 Length=11138919 Score = 95.1 bits (104), Expect = 8e-15 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| |||||||||||| | || || ||||||||||| ||||| || Sbjct 6551787 AAGATGCAGATTTTCGTAAAAACCCTCACGAGGAAGACCATCACTCTCGAGGTTGAACCC 6551846 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | |||| | || || || || || ||||| | || || ||| Sbjct 6551847 TCAGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCTGAT 6551906 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | | ||||| || ||| Sbjct 6551907 CAGCAAGGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGATATACTTTGTCTGACTAC 6551966 Query 23788 AACATACAAAAAGAG 23802 |||| ||||| ||| Sbjct 6551967 CACATTCAAAAGGAG 6551981 >seq9 Length=38779656 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||||| ||||||||| || || ||||| ||||| ||| | ||||| || Sbjct 2389280 AAGATGCAGATTTTCG-TAAAACCCTTACAGGGAAAACCATCACACTCAAGGTTGAACCC 2389222 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || | | |||| | ||| || || || || |||| | || || ||| Sbjct 2389221 TCAGATATGATAGAAAATGTGAAAGCCAAGATCCAGGATAAGTAAGGAATTCCTCCTGAT 2389162 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||| ||||| | | ||||| || ||| Sbjct 2389161 CAGCAAAGACTCATTTTTGCTGGCAAGCAACTAGAAGATTGATGTACTTTGTCTGACTAC 2389102 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || ||||| Sbjct 2389101 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAG 2389064 >seq94 Length=8087295 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23626 AAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATA 23685 |||||||||||||| ||||| ||||||||| | ||||| || | || | | | |||| Sbjct 5840708 AAAACCCTCACGGGGAAAACCATCACTCTCAAGGTTGAACCCTCAGATAATATAGAAAAT 5840649 Query 23686 TTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTT 23745 | || || || || || ||||| | || || ||||| || | | || ||| Sbjct 5840648 GTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTCATTTTT 5840589 Query 23746 GCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCC 23805 | ||||| ||||||||||| | | | ||||| || |||||||| ||||| |||||| Sbjct 5840588 CCTGGCAACCAACTGGAAGATGGATGTACTTTGTCTGACTACAACATTCAAAAGGAGTCC 5840529 Query 23806 ACATTACATTTAGTTTTAAG 23825 | | ||| | || ||||| Sbjct 5840528 TCTCTTCATGTTGTGTTAAG 5840509 >seq21 Length=25602908 Score = 89.7 bits (98), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAA-ACGATCACTCTCGAAGTTGACTC 23666 || |||||||| || || | |||||| | ||| || || ||||||||||| |||| | Sbjct 20609669 AAGATGCAGATATTTGTAATAACCCTTATGGGGGAAGACCATCACTCTCGAGATTGAACC 20609728 Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||| || | |||| | || || || || |||||||| | || || || Sbjct 20609729 CTTGGATACAATAGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGA 20609788 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| || | | || ||||| ||||| ||||||||||| | ||| ||| | || || Sbjct 20609789 TCAGCAAAGACTCATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTGTGTCTGACTA 20609848 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 |||||| ||||| |||||||| | || | || ||||| Sbjct 20609849 CAACATTCAAAAGGAGTCCACTCTTCACCTTGTATTAAG 20609887 >seq99 Length=7922563 Score = 86.0 bits (94), Expect = 4e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| |||||||||||||| || || ||||||||||| ||||| || Sbjct 586396 AAGATGCAGATTTTCGTAAAAACCCTCACGGGGAAGACCATCACTCTCGAGGTTGAACCC 586337 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| | || || || || || ||||| | || || ||| Sbjct 586336 TCGGATACGATAGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 586277 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACT 23759 || || | | || ||||| ||||| ||||| Sbjct 586276 CAGCAAAGACTCATTTTTGCTGGCAAGCAACT 586245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337977496798844