Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq51 158 3e-33 seq102 154 4e-32 seq46 145 2e-29 seq178 104 6e-17 seq12 91.5 4e-13 seq19 87.8 4e-12 seq121 84.2 5e-11 >seq51 Length=12882142 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||| || | | ||| | |||||| Sbjct 9170541 AGGACCAGGTGTAGGGTTGACTCTTTCTGGATATTGTAGTCAGAAAGAGTACCACCATCT 9170482 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| ||||| || | || ||||| || || |||||||| || ||| Sbjct 9170481 TCAAACTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATACCTTCTTTATCT 9170422 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 9170421 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 9170362 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| |||||||||| | ||||||||| Sbjct 9170361 TTGCCAGTCAGGCTTTTTATGAAGATTTGCATTTT 9170327 >seq102 Length=7754592 Score = 154 bits (170), Expect = 4e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||| | ||||| || |||||||| || ||||| | ||||| || | |||||| Sbjct 7635986 ACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 7635927 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| || | |||| ||| || || || ||||| || Sbjct 7635926 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAAACGAGTCTTTGCTGATCAGGAGGAATTCC 7635867 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| ||||||| ||| || || || |||| || || || | Sbjct 7635866 TTCCTTATCCTGGATCTTGACCTTCACATTTTCTATTGTATCCGAGGGGTCAACCTCGAG 7635807 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||| | | ||||||||||||| ||||| || Sbjct 7635806 AGTGATGGTCTTCCCCATGAGGGTTTTTATGAACATCTGCATCTT 7635762 >seq46 Length=13992998 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||| || | | ||| | |||||| Sbjct 3038593 AGGACCAGGTGCAGGGTTGACTCTTTCTGGATATTGTAGTCAGAAAGAGTACGACCATCT 3038534 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || | || |||||||| || |||||||| || ||| Sbjct 3038533 TCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATACCTTCTTTATCT 3038474 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || |||||||| || ||||| || || ||||| ||| Sbjct 3038473 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTC 3038414 Query 225682 TTGCCCGTCA 225691 ||||| |||| Sbjct 3038413 TTGCCGGTCA 3038404 >seq178 Length=3410906 Score = 104 bits (114), Expect = 6e-17 Identities = 157/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 225494 GAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTC 225553 ||||||| ||||| || |||||||| || ||| | | ||||| || ||||| Sbjct 768804 GAAGTCTTCACACAAGATGAAGAGTGGACTCCTTTCGAATGTTGTAGTC----AAAGTAT 768749 Query 225554 TCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTT 225613 |||||||| || |||| ||||| || || || ||| || || || ||| | |||| Sbjct 768748 ATCCATCTTCCAGTCGCTTGCCAGCAAAAATGGATCTTTGCTGATCAGGAGGAGTTCCTT 768689 Query 225614 CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673 |||| || |||||||| ||| ||| ||| || | ||||| | ||| | || || | Sbjct 768688 CCTTATCCTGGATCTTGGTCTTTACATTTTCTATTGCATCTGAAGGTTCATCCTCAAAAG 768629 Query 225674 TGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||| ||||| || || | ||||||||||| | ||||| || Sbjct 768628 TGATGGTCTTCCCTGTAAGGGTTTTTATGAAAATCTGCATCTT 768586 >seq12 Length=32490354 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| | ||||| |||| |||| ||||| || | || || | ||||||| Sbjct 14259417 AGGACCAAGTGCAAGGTGGACCCTTTCTGGATGTTGTAGTCAGACAGGGTGCACCCATCT 14259476 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||||||||| ||||| || | || ||||| || | | |||||||||| | Sbjct 14259477 TCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCAGGGAGGGTGCCTTCCTTGTGT 14259536 Query 225622 TGGATCTT 225629 |||||||| Sbjct 14259537 TGGATCTT 14259544 >seq19 Length=27850971 Score = 87.8 bits (96), Expect = 4e-12 Identities = 148/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||| | |||| || |||||||| || ||||| | | |||||| | |||||| Sbjct 6497371 ACGAAGTCTTAACACAAAATGAAGAGTGGACTCCTTTTGAATGTGGTAATCAGACAAAGT 6497430 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 |||||||| || | ||||| ||| || || |||| ||| || || || | ||| || Sbjct 6497431 ATGTCCATCTTCCAGTTCCTTCC-AGCAAAAATGAGTCTTTGCTGTTCAGGAGAAATTCC 6497489 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| | ||| |||| ||| ||| ||| || | | |||| || || || | Sbjct 6497490 CTCCACATTCTGGTTCTTGATCTTTACATTTTCTATCATAACCGAGGGTTAAACCTCAAG 6497549 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||| |||| || || || ||||||||||| Sbjct 6497550 GATGATGTTCTTCCCTGTAAAGGTTTTTATGAA 6497582 >seq121 Length=6509565 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 5018 ACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATGG 5077 ||| || ||||| || || ||| | || ||| || ||||| ||||||||||||||||| Sbjct 4878561 ACTGCAGTACCTGGCTCCTTACTCTGGCTGTTCCATGGGAGAGTATTTTAGAGATAATGG 4878502 Query 5078 TAAACATGCTTTAATCATCTACGATGATTTAAGTAAACA 5116 ||||||||||| || ||||| || || ||| |||||| Sbjct 4878501 CAAACATGCTTTGATTATCTATGACGACTTATCTAAACA 4878463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192412128368342