Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq118 293 2e-74 seq126 273 2e-68 seq78 96.9 3e-15 seq22 95.1 1e-14 seq148 93.3 4e-14 seq4 91.5 1e-13 seq395 87.8 2e-12 seq30 87.8 2e-12 seq20 87.8 2e-12 >seq118 Length=6727830 Score = 293 bits (324), Expect = 2e-74 Identities = 595/880 (68%), Gaps = 29/880 (3%) Strand=Plus/Plus Query 4252 CAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAA 4311 |||| | |||||| || || | || || || |||||||| ||||| |||| || |||| Sbjct 3435593 CAAAATGTTGGTACTCTGAAATTCATTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAA 3435652 Query 4312 TATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTA 4371 ||||||||||||||||||| ||||| ||| | | || ||| | || ||| Sbjct 3435653 TATTTTCCATAAAATCAAAGGGATTTTCTGCCTGGAAAACCTTTGAGAATCCAAGTTCTA 3435712 Query 4372 CAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAA 4431 |||| |||| || ||| ||||| || ||||||| |||| | || || ||||||| Sbjct 3435713 CAAGTAATCTGTTAGCCACAAACTCAGTATACTGTGTCATCAAAATACAATTCATTCCAA 3435772 Query 4432 TTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGA 4491 | || |||| || | ||| |||||||| || || || | || || || | | Sbjct 3435773 CGAGGACAACTGGTAAAGCTTCTGTTAAAAACTCCTGCTCAATTTTGACAGCCTCAATAA 3435832 Query 4492 TTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACG 4551 | || || | | | | |||| || || |||||||| ||||||| ||| | | | | Sbjct 3435833 TGATCTCCCTGACTCTCTCTTCTGAAGGCTTATTTACGAAGTATCAAAATATCAGGTAAG 3435892 Query 4552 CAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGG 4611 |||| ||||| |||| |||||| |||||||| || ||||| || ||||| || | ||| | Sbjct 3435893 CAAAGTCACAGTGCAGACCTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAG 3435952 Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671 ||| | | ||||||| || ||| | |||||||| ||||| || || || ||||| || | Sbjct 3435953 ACATAAGAACTCTCTTCTTTAGCTAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTC 3436012 Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATC 4730 |||||| || ||||| || || | || ||| || | || | | | ||| ||| Sbjct 3436013 TTTCTACAGCAGCAAAGGCCACCACTCTTTCCCCCAAAGTAGAT-TTTATATCTGCTATC 3436071 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790 ||| || | ||| | |||||||||| ||| || || ||||| | || | |||||| Sbjct 3436072 CATCACAAGGTCCAATCTGCTTTTTTCTGAACACATGGCATTGTTTCAATCACATTAAAT 3436131 Query 4791 AATTTA-CTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 || | | ||||| |||| || || ||||||||| |||| | || ||||| || Sbjct 3436132 AAAAAATCCCTTTTC--TTGGGATCTG-ATGTAAGTGTCTGTTAGCAAACTGTACATCTC 3436188 Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909 || || | ||| || || ||| | || || | |||| || || Sbjct 3436189 TGAGTGAACATTCTCGATGAGAATTT-------GTGAA---------CCTCTGGAACCTG 3436232 Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969 || || | || | || | |||||| |||| || || |||||||||||||| Sbjct 3436233 CACCTCCTGAC-------TGACACCACGTTTTCATTTATAATTCCATCACTGGCTGCAAA 3436285 Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGG 5029 ||| || |||| ||||| | | || | || || | ||||| || |||||||| || Sbjct 3436286 AAAGGCTAAAATGTGAGAGACCCAATATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGG 3436345 Query 5030 CAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTA 5089 | |||||| | ||| ||||| ||||| | ||||| || || |||| | | |||||| Sbjct 3436346 GAGATCTTTTGATAAGTCAACCTCTTCTGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTA 3436405 Query 5090 CATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA 5129 | |||| ||||||| ||||| || | || |||||| Sbjct 3436406 TGTTTTCCAAGTATCAGGGTACTGGATTGCAAAGATGACA 3436445 >seq126 Length=6050536 Score = 273 bits (302), Expect = 2e-68 Identities = 603/891 (68%), Gaps = 30/891 (3%) Strand=Plus/Plus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || |||| | ||||| ||| || ||||| ||||| || || || | ||||||| ||| Sbjct 4678291 TGATATTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCGTCCAGTGAAATATCCTCC 4678350 Query 4320 ATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTC---ACACT-TTAGAGCTACAAG 4375 ||||| ||||||||||| | | || || || | || | || ||| | ||| Sbjct 4678351 ATAAAGTCAAACGGATTTTCTACTCTGAAAACCTTGTGGAAACCCAGTTCCAGC-ATAAG 4678409 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 | ||| || || || || || | ||| |||| | | | ||| || ||||| | Sbjct 4678410 ---TGTGTCCGCCACCAACTCAATGTCCTGCTTCATTAATGTGTAGTCCATCCCAATGAG 4678466 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 || |||| | || | || | ||||| ||| ||| | || || || ||||| Sbjct 4678467 CTTCCCAGGCAAGGCCTCAGTGAGGAACTCCTGTCCTAGCCTAACAGCACTGGTCATTAT 4678526 Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555 ||||||| | | | | || ||||| | | | | || | | || | || ||||| Sbjct 4678527 TTCTTTTACTCTCTGCTCCGACGGTTTGTGTCCCAGGTGTTTGAGCATCAGTCAGGCAAA 4678586 Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCAT 4615 ||||| || ||||| || ||||||||||| ||||| || ||||| || || ||||| Sbjct 4678587 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGG-CCAGGCAT 4678645 Query 4616 TAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTC 4675 | |||| || || ||||| ||||| | |||||| || |||||||| || || ||||| Sbjct 4678646 CAGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGATTCCTTC 4678705 Query 4676 TACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATT 4734 || || ||||| ||||| | || || | | ||| ||||||| |||||| Sbjct 4678706 CACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCT-CTTTGTCCCCAATCCAAC 4678764 Query 4735 TTAATGCCC-AGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA-- 4791 || |||| || | || || ||||| || || | ||| | | ||||| || || | Sbjct 4678765 GCAAGGCCCCAGCT-GCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTGAAGAGA 4678823 Query 4792 ATTTACTTTTTTCAAATGGG--TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 | || | ||| | |||| |||| ||| |||||||| || || || ||||||||||| Sbjct 4678824 AATTCCCTTTCT----TGGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTC 4678879 Query 4850 AGAATGTATATTTTCTATAGCAATCT-GAAAT--------CCGTAAAAGCATCTAGCTTC 4900 |||||| || ||||| || ||||| | | ||| | || || || | || || Sbjct 4678880 AGAATGAATGTTTTCCATGGCAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCCTC 4678939 Query 4901 TGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACT 4960 ||| | |||||||| | | ||||| ||| || |||||||| |||||||| || ||||| Sbjct 4678940 TGTAATCTGAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCATTTACTATGCCATCACT 4678999 Query 4961 GGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTT 5020 ||||| ||||| |||| |||||| ||||| ||||| || | ||||| | || Sbjct 4679000 TGCTGCGAAAAAAGCCAGAACATGTGATATGAAGTATCTCTCTTTGGGCTTCAAGGTTGC 4679059 Query 5021 CCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 |||||| | | || |||| | ||| || || ||| | ||||| || ||| | ||||| Sbjct 4679060 CCAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCCGTCCACAAAGACACCTCCGC 4679119 Query 5081 TTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131 ||| || ||||| |||||| ||| | || | || |||| |||||||| Sbjct 4679120 TTTCTTATACATTTGCCAAATGTCATGGTATTCGATAGGAAAGATGACAAA 4679170 >seq78 Length=9532245 Score = 96.9 bits (106), Expect = 3e-15 Identities = 168/241 (70%), Gaps = 5/241 (2%) Strand=Plus/Plus Query 34303 AGCAAAAACATACAAATGGTTCAGTATATTTATAAAAACACATCTTCTTACGGAGATCCT 34362 || ||||||| ||||||||| || |||||||| ||| ||||| || | | | ||| Sbjct 8401383 AGGAAAAACAAACAAATGGTACAATATATTTACAAATACACAAGTTATCCTG---ACCCT 8401439 Query 34363 CTAATGTTGATGAAAAGCGCTAGAAGTAACTGCTGGGATAAAACCGCTGAGTACGGTCTT 34422 || ||||||||||||||||||||| || ||||||| |||| | ||||| || || Sbjct 8401440 ATACTGTTGATGAAAAGCGCTAGAAATAGCTGCTGGTCTAAAGATTCAGAGTATGGACTC 8401499 Query 34423 TACTCAGTATATCAAGGAGGAATACACTATCTaaaaaaaGGAGATAGTGTGTTTGTAACA 34482 || || | || ||||| |||||| | || || || || || | ||||| | Sbjct 8401500 TATTCCATCTACCAAGGGGGAATATTTGAGCTTAAGCAAAATGACAGAATTTTTGTTTCT 8401559 Query 34483 GTTACTAACAAAAACTTTTTAGCGATGGACTACAGAAGTGA-CTATTTTGGAGCGTTTTT 34541 || ||||| | | || ||| |||||| | ||||| | | |||||| || ||||| Sbjct 8401560 GTAACTAATGAGCAGTTGGTAGACATGGACCA-AGAAGCCAGTTTTTTTGGGGCCTTTTT 8401618 Query 34542 A 34542 | Sbjct 8401619 A 8401619 >seq22 Length=23169006 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||||||||| ||||| || ||||| || | || ||||| | |||| || || Sbjct 2785904 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2785845 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| ||| Sbjct 2785844 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGGCT 2785785 Query 4692 AC 4693 || Sbjct 2785784 AC 2785783 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871 |||| ||| |||||||| || || || ||||||||||||||||| || ||||| || ||| Sbjct 2782830 TCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAATGTTTTCCATGGCA 2782771 Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926 || || || || || || || | || ||||| | |||||||| | | ||||| Sbjct 2782770 ATTTGGAAGCCATAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATC 2782716 >seq148 Length=4854373 Score = 93.3 bits (102), Expect = 4e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 31772 GTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGA 31831 || || || || ||||| | || | ||||| ||||| || ||| | ||||||| | Sbjct 1404742 GTGAAGACAGACATTCAGACAGCTCTCCCTTCTGGGTGTTAGGGAAAAGTAGCTCCATGT 1404801 Query 31832 TCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTAT 31891 ||||| ||||| | |||||||||| ||||| || || ||||| |||||| ||| ||| Sbjct 1404802 TCTGGCTTGGCTGAAAAACACTTTACAGACGTAGGAGCTGGTGTCATAGATGAAGATTAT 1404861 Query 31892 AGAGGAAACGTTGGAATTGTGTTGTTTAATTTTG 31925 |||||||| | ||| | | | |||||||||| Sbjct 1404862 AGAGGAAATGCTGGTGCTATACTATTTAATTTTG 1404895 >seq4 Length=47749213 Score = 91.5 bits (100), Expect = 1e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 |||| |||| |||||| || || ||||| || || |||||||| ||||| |||| ||| Sbjct 24680795 AACAGCAAAACGTTGGTACTCTGAAACTCGTTTCTCAAAGAAATTCGTTTTTCCTTGTAA 24680736 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATT 4336 ||||| ||||||||||||||||| ||||| Sbjct 24680735 AGAAATGTTTTCCATAAAATCAAAAGGATT 24680706 >seq395 Length=167030 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 31772 GTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGA 31831 || || ||| | ||||| || || | ||||| | || || ||| | || ||||| Sbjct 55846 GTGAAGACCAACATTCAGATAGCTCTTCCTTCTGACTGTTAGGGAAGCATGGCTCCACAT 55905 Query 31832 TCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTAT 31891 ||||| ||| || ||||||||||| || || || | ||||| |||||| ||| ||| Sbjct 55906 TCTGGCATGGTTGTGAAACACTTTATAGATGTAGGAACTGGTGTCATAGATGAAGATTAT 55965 Query 31892 AGAGGAAACGTTGGAATTGTGTTGTTTAATTTT 31924 | |||||| ||||| ||||| | ||||||||| Sbjct 55966 ACAGGAAATGTTGGTGTTGTGCTATTTAATTTT 55998 >seq30 Length=19069346 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/164 (73%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 31772 GTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGA 31831 || || || || ||||| || || | ||| | ||||| || ||| || ||| ||| | Sbjct 10367668 GTGAAGACAGACATTCAGATAGCTCTTCCTCCTGGGTGTTATGGAAGAGTAGTTCCATGT 10367609 Query 31832 TCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTAT 31891 |||| ||||| | ||||||||||| || || || || ||||| |||||| || ||| Sbjct 10367608 TCTGC-TTGGCTGCAAAACACTTTATAGATGTAGGAGCTGGTGTCATAGATGAGGATTAT 10367550 Query 31892 AGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAA 31932 |||||||| | ||| ||| | ||||||||||| |||||| Sbjct 10367549 AGAGGAAATGGTGGTGGTGTACTATTTAATTTTGGCAAAGAAAA 10367506 >seq20 Length=27606538 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 31801 TTCAGGGTGCTACGGACGAATAGCTCCTAGATCTGGATTGGCAGTTAAACACTTTATCGA 31860 ||| ||||| ||| || || |||| || | ||||| ||||| | |||||| |||| || Sbjct 8029579 TTCTGGGTGTTACAGAAGAGTAGCCCCATGTTCTGGCTTGGCTGCAAAACACATTATAGA 8029638 Query 31861 CGTGGGTGCGGGTGTTATAGATTCAGACTATAGAGGAAACGTTGGAATTGTGTTGTTTAA 31920 ||| || || || || |||||| || |||||||||| ||||| |||| | ||||| Sbjct 8029639 CGTAGGAGCTGGCGTCATAGATGAAGCTTATAGAGGAAGTGTTGGTGTTGTACTATTTAA 8029698 Query 31921 TTTTGG 31926 |||||| Sbjct 8029699 TTTTGG 8029704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427009040030069