Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq223 316 2e-81 seq283 150 1e-31 seq12 138 8e-28 >seq223 Length=2232465 Score = 316 bits (350), Expect = 2e-81 Identities = 489/690 (71%), Gaps = 10/690 (1%) Strand=Plus/Minus Query 27106 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 27165 ||||| ||||| || || |||| |||||| |||||||||| |||||||||| |||||| Sbjct 1613053 GGAAAAGGTCTTGGTTCTCTCTGAAGCTGAATCTTCAGCGGCTCCACGTGATTCAGGTAA 1612994 Query 27166 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 27225 | || || ||||||| || || ||||| || || || | || || |||| ||| | Sbjct 1612993 ATATGTGCATCTCCCAAAGTATGTACAAAGTCACCTGGCTTCAGACCAGTGATGTGCGTG 1612934 Query 27226 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 27285 ||| |||||||||| || ||||||||||| ||||| || || || || || ||| |||| Sbjct 1612933 ATCTTGTACGTGAGCAGGGAGTAGCTGGCAATGTTGAACGGCACACCCAGGCCCGTGTCT 1612874 Query 27286 CCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATG 27345 || ||| |||||| ||||| | | || || || | ||||| ||||| || | | Sbjct 1612873 CCTGACTGCTGGTACAGCTGGC-GGTCAGTTCACCGTTCACCACGTAGAACTGGCAGAAG 1612815 Query 27346 GCGTGGCACGGAGGAAGAGCCAT--GAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACACG 27402 || ||||||||||| || | ||| |||| ||| ||||| |||||||| || | || | Sbjct 1612814 GCATGGCACGGAGGTAGTGTCATCAGAGG---AAGATCTTTTGGGTTCCAAGCACGCATG 1612758 Query 27403 ATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCC 27462 ||||| | ||||| || |||||| | ||||| || | | || |||| || | Sbjct 1612757 ATGATTCTTCTGTCATCAGGGTTGGTTTTGATGGTATCAATCACTTTCTGCAATTGGT-A 1612699 Query 27463 ACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCAT 27522 || || || || || ||| ||| || |||| |||||||| ||||||||||| Sbjct 1612698 ACTCCTTGACCTGAATAATCTGAATCCATATCTTTGTATTCTGCTCCAAAATGCCTCCAC 1612639 Query 27523 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCC 27582 ||||| || || || | || | ||| || ||||| || | || ||| | ||| Sbjct 1612638 TGGAAGCCATAAACTAGGCCAAAGTCACCTTCTTCTCTTTTGGATAATCCCAGGCTATCC 1612579 Query 27583 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 27642 |||||||||| | || ||||| |||||||| || || || || || |||||||| Sbjct 1612578 AAAAAGTCTCGGTGTCCATTGGCATCCCAGATTTTCACTCCTTTGGAAGATAGCTCTTTA 1612519 Query 27643 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 27702 | |||||||| || ||| |||||||||| |||||||| || ||||||| || || Sbjct 1612518 GCTTTTGTGGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAACACA 1612459 Query 27703 CTCTTGGTCGTGAGGAGGGGAAACTGTCCCTTGAGGCCGTACCTGGCCTGAGAACCAAAC 27762 | ||||| || || || ||||| | | || ||| ||| | |||||| |||||| Sbjct 1612458 CATTTGGTTGTCAGCAGTGGAAATTCATCTTTCCGGCTGTAGCGGGCCTGCATGCCAAAC 1612399 Query 27763 ACGGACAAGACT-CCCGTGCCCGTCCTGTC 27791 || ||| ||| | || ||| |||| | ||| Sbjct 1612398 ACCGAC-AGAGTGCCGGTGTCCGTGCGGTC 1612370 >seq283 Length=1095284 Score = 150 bits (166), Expect = 1e-31 Identities = 232/325 (71%), Gaps = 7/325 (2%) Strand=Plus/Plus Query 27104 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 27163 || |||||| ||| | || |||| ||||| ||||||| || || | ||||| ||||| Sbjct 231029 TGAGAAAGG-TCTTAGTTCTCTCTGACGCTGAATCTTCAGTGGCTCAATGTGATTCAGGT 231087 Query 27164 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 27223 | | | || ||||||| || || ||||| || || || | || ||||||||||| | Sbjct 231088 AAATATATGCATCTCCCAAAGTATGTACAAAGTCACCTGGCTTCAGACCGGTGACGTGTG 231147 Query 27224 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 27283 ||||| || ||||| || |||| ||||| ||||| || || | || || || |||| Sbjct 231148 AGATCATATAGGTGAGCAGGGAGTGACTGGCCATGTTGAATGGCAAGCCCAGGCCTATGT 231207 Query 27284 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCA-TCGCTTACGTAAAACTGACAT 27342 | || ||| |||||| |||||||| || ||||| ||| || | | | ||||| || Sbjct 231208 CTCCTGACTGCTGGTACAGCTGACAGGATAGCTCACCAGTCAC-CCTGAAGAACTGGCAA 231266 Query 27343 ATGGCGTGGCACGGAGGAAGAGCCAT--GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACA 27400 | ||| || ||| ||| || ||||| |||| || ||||| |||||||| || || Sbjct 231267 AGGGCATGATACGAAGGCAGCGCCATCAGAGGTACA--TCTTTTGGGTTCCAAGCACATG 231324 Query 27401 CGATGATGCGCCTGTCTTCTGGGTT 27425 |||||| | |||| || ||||| Sbjct 231325 TGATGATTCTTCTGTTGTCAGGGTT 231349 >seq12 Length=32490354 Score = 138 bits (152), Expect = 8e-28 Identities = 129/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||||||||| || ||||||||||||||||| || || Sbjct 30593165 AGACCAGTGATGTGCGCGATCATGTACGTGAGCAGGGAGTAGCTGGCGATGTTGAACGGC 30593106 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || |||||||| || |||| |||||| ||||| || || ||||| || | Sbjct 30593105 ACACCCAGACCCATGTCTCCTGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 30593046 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| ||||| || | ||| ||||||||||| || ||||| || Sbjct 30593045 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGTAGTGCCATCAG 30593002 Score = 105 bits (116), Expect = 5e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| || ||||| ||||||||||| ||||| || || || || |||| ||| Sbjct 30589939 CATATCTTTGTATTCGGCTCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTC 30589880 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 || ||||| || | ||| ||| | ||||||||||||| ||| || ||||| || Sbjct 30589879 ACCTTCTTCTCTTTTGGAGAATCCCAGGCTATCCAAAAAGTCTCGGGACCCATTGGCATC 30589820 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||| || || ||||| || || ||||| | |||||| || || Sbjct 30589819 CCAGATTTTCACTCCCTTGGAAGATAGTTCTTTAGCGTTTGTCGATCC 30589772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369472105245383