Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq126 369 5e-97 seq118 269 4e-67 seq22 125 1e-23 seq1 111 2e-19 seq36 98.7 1e-15 seq30 91.5 2e-13 >seq126 Length=6050536 Score = 369 bits (408), Expect = 5e-97 Identities = 658/952 (69%), Gaps = 25/952 (3%) Strand=Plus/Plus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| |||| |||||| |||| || | |||| ||| ||| | || ||||| ||||| Sbjct 4678224 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCC 4678283 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 ||| | ||||||| || || | ||||| || || ||||| || || |||| ||| || Sbjct 4678284 CATCCTCTGATATTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCGTCCAGTGAAAT 4678343 Query 47906 ATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGA 47965 || |||||||| ||||| ||||| || | | ||| || | || || | ||| Sbjct 4678344 ATCCTCCATAAAGTCAAACGGATTTTCTACTCTGAAAACCTTGTGGAAACCCAGTTCCAG 4678403 Query 47966 AATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTAT 48025 || ||| | || || || || || || | ||||| | | | | ||| || || Sbjct 4678404 CATAAGTGTGTCCGCCACCAACTCAATGTCCTGCTTCATTAATGTGTAGTCCATCCCAAT 4678463 Query 48026 AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT 48085 || || | || | ||||| || || ||||| ||| | | | |||||| || Sbjct 4678464 GAGCTTCCCAGGCAAGGCCTCAGTGAGGAACTCCTGTCCTAGCCTAACAGCACTGGTCAT 4678523 Query 48086 TATCGATGTTACCGTTTCCTC--AC--TTGGTGGATACAACAAATGTTTAAACATTAAAC 48141 ||| | |||| | | ||| || || ||| | | || ||||| | ||| | | Sbjct 4678524 TATTTCTTTTACTCTCTGCTCCGACGGTTTGTG--TCC--CAGGTGTTTGAGCATCAGTC 4678579 Query 48142 ATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGAC 48201 | ||||| ||||| || | ||| |||||||| ||||| | ||| || ||||||||| | | Sbjct 4678580 AGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGG-C 4678638 Query 48202 CGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATA 48261 | ||||| ||||| ||||| |||||||| ||||||| || ||||| |||||||| || | Sbjct 4678639 CAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGA 4678698 Query 48262 TGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---A 48318 | ||||| || || ||||| || || | ||||| || | || || |||| | Sbjct 4678699 TTCCTTCCACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAA 4678758 Query 48319 TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 48378 |||| || |||| | | ||||||||||| |||||| ||||| |||| |||||||| | Sbjct 4678759 TCCAACGCAAGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTGA 4678818 Query 48379 AGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTT 48438 ||||||| | |||| | | |||||||| |||||| || || | ||||||||||||| Sbjct 4678819 AGAGAAATTCCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTT 4678878 Query 48439 CGGAGTGAATATTTTCAATTGCCATCTGA-AAT--------CCGTAAAAACATCTCGCTT 48489 | || ||||| ||||| || || || || ||| | || ||||| | || | Sbjct 4678879 CAGAATGAATGTTTTCCATGGCAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCCT 4678938 Query 48490 CTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCAC 48549 |||| ||||| || || | ||||||||| |||| || ||||||||||| ||||||| Sbjct 4678939 CTGTAATCTGAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCATTTACTATGCCATCAC 4678998 Query 48550 TAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTAT 48609 | || || ||||| || | |||||| || || ||| | || |||| ||| | Sbjct 4678999 TTGCTGCGAAAAAAGCCAGAACATGTGATATGAAGTATCTCTCTTTGGGCTTCAAGGTTG 4679058 Query 48610 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTG 48669 ||||| | || || || || | ||| || || ||||| ||||| || || |||| | Sbjct 4679059 CCCAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCCGTCCACAAAGACACCTCCG 4679118 Query 48670 CTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 |||| |||||||| | ||| || ||| ||||| ||| || || || ||||| Sbjct 4679119 CTTTCTTATACATTTGCCAAATGTCATGGTATTCGATAGGAAAGATGACAAA 4679170 >seq118 Length=6727830 Score = 269 bits (298), Expect = 4e-67 Identities = 573/854 (67%), Gaps = 30/854 (4%) Strand=Plus/Plus Query 47870 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATT 47929 |||||| || ||||| ||||| |||| ||| || |||||||||||||||||||| ||||| Sbjct 3435618 TTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTCCATAAAATCAAAGGGATT 3435677 Query 47930 AACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 47989 |||| | ||| ||| ||||| | |||| || | ||| | || || || || Sbjct 3435678 TTCTGCCTGGAAAACCTTTGAGAATCCAAGTTCTACAAGTAATCTGTTAGCCACAAACTC 3435737 Query 47990 TATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT 48049 |||| | |||||| |||||||||||| | || |||||||| ||| || || Sbjct 3435738 AGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGACAACTGGTAAAGCTTCTGT 3435797 Query 48050 AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACT 48109 | |||||| || || || ||||||| || | || ||| | || | || || Sbjct 3435798 TAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTCCCTGACTCTCTCTTCTGA 3435857 Query 48110 TGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATC 48169 || || | || | | ||| || | | ||||| ||||| || ||||||||||| Sbjct 3435858 AGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTCACAGTGCAGACCTTCATC 3435917 Query 48170 TCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCA 48229 ||| || || | ||| || ||||| ||||| || | ||| || | | || || ||| | Sbjct 3435918 TCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAGAACTCTCTTCTTTAGCTA 3435977 Query 48230 AAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAG 48289 ||||| || || |||||||| || ||||| || | |||||| || ||||| || | Sbjct 3435978 GAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTACAGCAGCAAAGGCCACCAC 3436037 Query 48290 TCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATCAGCCTTCTT 48346 ||| || || || | | || | | |||||| | | |||||| || || || Sbjct 3436038 TCTTTCCCCCAAAGTAGATTTTATATCTGCTATCCATCACAAGGTCCAATCTGCTTTTTT 3436097 Query 48347 CTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTT 48406 || ||||| ||||||||||| || ||||||| | ||| | ||| ||| ||| | Sbjct 3436098 CTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATCCCTTTTCTTGGGATC--T 3436155 Query 48407 AACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTG 48466 | |||||| ||| ||| | ||| ||||| || ||||||| ||| || | || Sbjct 3436156 GATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAACATTCTCGA--------TG 3436207 Query 48467 A-AATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCA 48525 | ||| || || | |||| | ||| |||||| || | || ||| Sbjct 3436208 AGAATTTGTGAA---------CCTCTGGAACCTGCACCTCCTGACTGA------CA-CCA 3436251 Query 48526 AATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAAT 48585 || ||||||| ||||||||||| || |||||||| ||||| | || | ||| Sbjct 3436252 CGTTTTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTAAAATGTGAGAGACCCAAT 3436311 Query 48586 ATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTT 48645 |||| || | || | || || ||||||| | || ||||||||||| || || |||| Sbjct 3436312 ATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATAAGTCAACCTCTT 3436371 Query 48646 CAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGA 48705 | |||||||| || ||||| | | | | ||| || | ||||| ||||| ||| |||| Sbjct 3436372 CTGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCCAAGTATCAGGGTACTGGA 3436431 Query 48706 TTGGGAAAATAACA 48719 ||| || || ||| Sbjct 3436432 TTGCAAAGATGACA 3436445 >seq22 Length=23169006 Score = 125 bits (138), Expect = 1e-23 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| || ||||||||||| || ||||| ||||| ||||| ||| Sbjct 2785904 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2785845 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||||| || ||||| ||||||||||| || ||||| || |||||||| || Sbjct 2785844 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGGC 2785786 Score = 105 bits (116), Expect = 9e-18 Identities = 111/144 (77%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 47790 GTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCC 47845 |||| |||| |||||| |||| || | |||| ||| ||| | || ||||| ||||| Sbjct 2788382 GTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCC 2788323 Query 47846 CATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATAT 47905 ||| | |||||||| || || | ||||| || || ||||| || ||||||| ||| || Sbjct 2788322 CATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAAT 2788263 Query 47906 ATTTTCCATAAAATCAAATGGATT 47929 ||| |||||||| ||||||||||| Sbjct 2788262 ATTCTCCATAAAGTCAAATGGATT 2788239 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 48330 GCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 48385 |||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct 2785641 GCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTTTCAATAGCATTGAAGAGAAA 2785586 >seq1 Length=73491278 Score = 111 bits (122), Expect = 2e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| | |||||||| || || Sbjct 30976463 GTGCCAGCATTGAAGAGAGTGGGAGAAGCATGAGTAAACCACCTCTCAGAAAGAAGGTTA 30976404 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 ||||||||||| || | || ||||| ||| ||||| ||||| | || | ||||||| Sbjct 30976403 TATGTTTCAATTGCAGCATCAATGTCTTCTTGGTGAATCCCTACAGAGACCCTCATCAAC 30976344 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 |||||||| ||||||||| || Sbjct 30976343 ATATGCTGCGGTCTTTCAGCC 30976323 Score = 109 bits (120), Expect = 8e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| | ||| Sbjct 31005461 TGAAATTCTCCTGACAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAT 31005402 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || |||| || ||||| || ||||| || ||||| || || | | |||||| Sbjct 31005401 TCATTATTCCCCAGGATCTGAGCGGTTGAAGCTGTAGGCATTGGGGCAATAAGTAAACTG 31005342 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 31005341 TTTCTTATACCAT 31005329 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| || || || | || | ||| Sbjct 30995008 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 30994949 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| |||||||| | || || | |||||| || Sbjct 30994948 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTGCATGCCAAGGC 30994889 Query 78123 TC 78124 || Sbjct 30994888 TC 30994887 Score = 86.0 bits (94), Expect = 9e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974 ||||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||| || Sbjct 30995560 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 30995501 Query 77975 CATCAATGACCAGTC 77989 ||| || |||||||| Sbjct 30995500 CATTAAAGACCAGTC 30995486 >seq36 Length=16585812 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/152 (75%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 47782 CATTTATGGTTC-TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GAC 47837 ||| | | |||| |||| |||||| |||| || | |||| ||| ||| | || ||| Sbjct 11366875 CATCTCTAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGAC 11366934 Query 47838 ATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCC 47897 || |||| ||| | |||||||| || || | ||||| || || ||||| || |||||| Sbjct 11366935 ATCACTCTCATCCTCTGATATTCCCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCC 11366994 Query 47898 AATGATATATTTTCCATAAAATCAAATGGATT 47929 | || ||||| |||||||| ||||||||||| Sbjct 11366995 AGGGAAATATTCTCCATAAAGTCAAATGGATT 11367026 >seq30 Length=19069346 Score = 91.5 bits (100), Expect = 2e-13 Identities = 245/364 (67%), Gaps = 17/364 (5%) Strand=Plus/Plus Query 45876 TCCAGTGGATCCAAATCCT--TGAGCGTCTCTTTCAGTACCATCTAGAGATTGCACTTCC 45933 ||||||||| ||||| ||| ||| | | |||||||| |||| | | ||| ||||| Sbjct 10367381 TCCAGTGGAACCAAAACCTCCTGAAC--CCCTTTCAGTGTCATCCAAAACTTGAACTTCT 10367438 Query 45934 TTCAGATCAGGATAATATA-TACGTTGATAGATTAGTTGAGCTATTCTATCACCCGTATT 45992 | || |||||| | | | | || | | || || || || || | |||| | | || Sbjct 10367439 ATT---TCTGGATAAAAAAATCCATTCACAAATGAGATGTGCAATCCGATCATCTTTCTT 10367495 Query 45993 TATTTCAAATATATCTTTTCCATTATTGATCAGAATGACTCCAATTGTCCCTCTATAATC 46052 | |||||| | ||||| ||| ||| | || | | ||| | ||||||||||| Sbjct 10367496 GACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACACCACCACCATTTCCTCTATAATC 10367555 Query 46053 TTCATCTATTACTCCCCCTCCCACATCGATA---CCTTTTAGAGACAGTCCAGATCTAGG 46109 |||||||| || || |||| ||||| ||| |||| || || |||| | || Sbjct 10367556 CTCATCTATGACACCAGCTCCTACATCTATAAAGTGTTTTGCAGCCA-AGCAGAACATGG 10367614 Query 46110 AGCTATTCTTCCATAACAGAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATCT 46169 | ||| |||||||||||| || | || ||| |||| ||||| || | |||| Sbjct 10367615 AACTACTCTTCCATAACACCCAGGAGGAAGAGCTATCTGAATGTCTGTCTTCA-CAAT-A 10367672 Query 46170 CCTTTCTCC--AGGAGGGATAGTATAGTCGTACGCACTGTATAAATCATATCCTGCTGCA 46227 |||||||| ||| | || ||||| || || |||||||||| | || ||||| || Sbjct 10367673 GCTTTCTCCATAGGTAGTATTGTATAATCATAGGCACTGTATAGGTTGTAGCCTGCAGC- 10367731 Query 46228 TGAT 46231 |||| Sbjct 10367732 TGAT 10367735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694601130575520