Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq126 372 4e-98 seq118 242 5e-59 seq22 120 4e-22 seq4 120 4e-22 seq1 118 2e-21 >seq126 Length=6050536 Score = 372 bits (412), Expect = 4e-98 Identities = 650/943 (69%), Gaps = 16/943 (2%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 46339 |||| ||||| |||| || | |||| ||| ||| | | |||||| |||||||| Sbjct 4678229 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 4678288 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 | || |||| ||||| | ||||| || || ||||| || || |||| ||| |||| | Sbjct 4678289 TCTGATATTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCGTCCAGTGAAATATCCT 4678348 Query 46400 CCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCA 46459 ||||||| ||||||||||| || | ||| || | || || | ||| || | Sbjct 4678349 CCATAAAGTCAAACGGATTTTCTACTCTGAAAACCTTGTGGAAACCCAGTTCCAGCATAA 4678408 Query 46460 GTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTT 46519 || | || || || || || || | | ||||| | | | | ||| || ||||| | Sbjct 4678409 GTGTGTCCGCCACCAACTCAATGTCCTGCTTCATTAATGTGTAGTCCATCCCAATGAGCT 4678468 Query 46520 TGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCG 46579 | | || | ||||| || || ||||| ||| | | | |||||| | ||||| Sbjct 4678469 TCCCAGGCAAGGCCTCAGTGAGGAACTCCTGTCCTAGCCTAACAGCACTGGTCATTATTT 4678528 Query 46580 ATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAAT 46639 | ||||| | | ||| ||| || || ||||| | ||| | || ||||| | Sbjct 4678529 CTTTTACTCTCTGCTCCGACGGTTTGTGTCCCAGGTGTTTGAGCATCAGTCAGGCAAAGT 4678588 Query 46640 CACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTA 46699 |||| || | || |||||||| ||||| | ||| || ||||||||| ||| |||||| | Sbjct 4678589 CACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGGGCC-AGGCATCA 4678647 Query 46700 GTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 46759 |||| || || |||||||| ||||| | || ||||| |||||||| || || ||||| | Sbjct 4678648 GTCCTCGTTTCTTGAGCCAGAATATTGAGGCAAAAGAACCAGAAAAAAAGATTCCTTCCA 4678707 Query 46760 CAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTTT 46816 | || || || || |||| | ||||| || | || || || | |||||| | Sbjct 4678708 CTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCA 4678767 Query 46817 GAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 46876 |||| | | ||||| ||||| |||||| ||||| |||| |||||||| |||||||| | Sbjct 4678768 AGGCCCCAGCTGCCTTCTTCTTGACACAAAGCATTATTTCAATAGCATTGAAGAGAAATT 4678827 Query 46877 ttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAA 46936 |||| | |||||||| || || || || | |||||||||||||| ||||||| Sbjct 4678828 CCCTTTCTTGGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAA 4678887 Query 46937 TGTTTTCAATAGCCATCT-GAAAT--------CCGTAAAAACATCTTGCTTCAGTAATCT 46987 ||||||| || || || | | ||| | || ||||| | || || ||||||| Sbjct 4678888 TGTTTTCCATGGCAATTTGGCAATTTCTATGGCTATAGAAACAACGGGCCTCTGTAATCT 4678947 Query 46988 GTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAA 47047 | || ||| | ||||||||| ||| || ||||| ||||| |||||||| || || | Sbjct 4678948 GAACTTCTTGGCTAAATCGTTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCGA 4679007 Query 47048 AAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCAT 47107 |||| |||| |||||| || || ||| | || | || ||| | ||||| | Sbjct 4679008 AAAAAGCCAGAACATGTGATATGAAGTATCTCTCTTTGGGCTTCAAGGTTGCCCAGTGCT 4679067 Query 47108 TGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTAT 47167 || || || || | ||| || || ||||| ||||| || ||| |||| ||||| |||| Sbjct 4679068 GAATGTCCTTAGAAAGATCCACCTCCTCAGCCGTCCACAAAGACACCTCCGCTTTCTTAT 4679127 Query 47168 ACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 |||| | ||| || ||| | |||| ||| ||||| || ||||| Sbjct 4679128 ACATTTGCCAAATGTCATGGTATTCGATAGGAAAGATGACAAA 4679170 >seq118 Length=6727830 Score = 242 bits (268), Expect = 5e-59 Identities = 567/854 (66%), Gaps = 30/854 (4%) Strand=Plus/Plus Query 46359 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATT 46418 |||||| || ||||| ||||| |||| ||| || |||||||||||||||||||| ||||| Sbjct 3435618 TTTCTCAAAGAAATTCGTTTTTCCTTGCAAAGAAATATTTTCCATAAAATCAAAGGGATT 3435677 Query 46419 AGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 46478 | | ||| ||| ||||| | |||| || | ||| | || || || || Sbjct 3435678 TTCTGCCTGGAAAACCTTTGAGAATCCAAGTTCTACAAGTAATCTGTTAGCCACAAACTC 3435737 Query 46479 TATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGT 46538 ||||| | |||||| |||||||||||| | ||| || |||| ||| || || Sbjct 3435738 AGTATACTGTGTCATCAAAATACAATTCATTCCAACGAGGACAACTGGTAAAGCTTCTGT 3435797 Query 46539 AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACT 46598 | |||||| || ||||| ||||||| || || ||| | ||| | || || Sbjct 3435798 TAAAAACTCCTGCTCAATTTTGACAGCCTCAATAATGATCTCCCTGACTCTCTCTTCTGA 3435857 Query 46599 TGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATC 46658 || || | || | | ||| || | | ||||| ||||| || || |||||||| Sbjct 3435858 AGGCTTATTTACGAAGTATCAAAATATCAGGTAAGCAAAGTCACAGTGCAGACCTTCATC 3435917 Query 46659 TCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCA 46718 ||| || || | ||| || ||||| ||||| |||| ||| || | | ||| || ||| | Sbjct 3435918 TCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCAGACATAAGAACTCTCTTCTTTAGCTA 3435977 Query 46719 AAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAG 46778 |||||||| || |||||||| || ||||| || | ||||||||| || || || || | Sbjct 3435978 GAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCTTTCTACAGCAGCAAAGGCCACCAC 3436037 Query 46779 TCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCTTTGAGCCCAATCAGCCTTTTT 46835 ||| || || || | | | ||| ||||| | | |||||| || ||||| Sbjct 3436038 TCTTTCCCCCAAAGTAGATTTTATATCTGCTATCCATCACAAGGTCCAATCTGCTTTTTT 3436097 Query 46836 CTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTT 46895 || ||||| ||||||||||| || ||||||| | ||| | ||| | ||| | Sbjct 3436098 CTGAACACATGGCATTGTTTCAATCACATTAAATAAAAAATCCCTTTTCTTGGGATC--T 3436155 Query 46896 AACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAAT-AGCCATCT 46954 | || || ||| ||| | ||| ||||| ||||| |||| || || || || Sbjct 3436156 GATGTAAGTGTCTGTTAGCAAACTGTACATCTCTGAGTGAACATTCTCGATGAG------ 3436209 Query 46955 GAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACA 47014 ||| || || | || | || ||| ||||| || | || || Sbjct 3436210 --AATTTGTGAA---------CCTCTGGAACCTGCACCTCCTGACTGA------CA-CCA 3436251 Query 47015 AATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAAT 47074 || ||||| | ||||||||||| || |||||||| || || | || | ||| Sbjct 3436252 CGTTTTCATTTATAATTCCATCACTGGCTGCAAAAAAGGCTAAAATGTGAGAGACCCAAT 3436311 Query 47075 ATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTT 47134 |||| ||||| | | || || ||||||| | || ||||||||||| || || |||| Sbjct 3436312 ATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCTTTTGATAAGTCAACCTCTT 3436371 Query 47135 CAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGA 47194 | ||||||||||| || || | | | | ||| || | ||||| ||||| | || |||| Sbjct 3436372 CTGCTGTCCAGAAGGATGCTTGTTCCTGTTTGTATGTTTTCCAAGTATCAGGGTACTGGA 3436431 Query 47195 TCGGAAAAATAACA 47208 | | ||| || ||| Sbjct 3436432 TTGCAAAGATGACA 3436445 >seq22 Length=23169006 Score = 120 bits (132), Expect = 4e-22 Identities = 101/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | ||| || ||||||||||| |||||||| ||||| || || ||| Sbjct 2785904 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2785845 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || ||||| ||||||||||| || ||||| || ||||| || || Sbjct 2785844 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCCGCAAAGGCT 2785785 Query 46774 ACAA 46777 |||| Sbjct 2785784 ACAA 2785781 Score = 86.0 bits (94), Expect = 9e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949 |||||||| || || || || | |||||||||||||| |||||||||||||| || || Sbjct 2782831 ATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGAATGTTTTCCATGGC 2782772 Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009 || || || || || ||||| | || || |||||||| || ||| | |||||| || Sbjct 2782771 AATTTGGAAGCCATAGAAACAACGGGCCTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 2782712 >seq4 Length=47749213 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || ||||| |||||||||||||| || || | ||| | Sbjct 24674284 CTTCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGCCCAGGCATAAGACCTCTCTTCT 24674225 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | ||||| |||||||| || |||||||| || ||||| || ||||||||||| || || | Sbjct 24674224 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 24674165 Query 46772 CGACAAGTCTCTCTCC 46787 | || | ||| || || Sbjct 24674164 CCACCACTCTTTCCCC 24674149 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 ||| ||||| ||||||||||| || || | ||| | ||||||||| ||||| |||||| | Sbjct 24663142 TACCTCTTCTGCTGTCCAGAAGGATGCTTGTGCCTGTTTATACATTTTCCAGATATCAGG 24663083 Query 47187 ATATTGGATCGGAAAAATAACAAATC 47212 || ||||| ||||| || ||||||| Sbjct 24663082 GTACTGGATTGGAAAGATGACAAATC 24663057 >seq1 Length=73491278 Score = 118 bits (130), Expect = 2e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||||||||| || || || |||||||| ||||| | ||| Sbjct 31005461 TGAAATTCTCCTGACAAGACTCTTCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAT 31005402 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || |||| || ||||| |||||||| || ||||| || || | | |||||| Sbjct 31005401 TCATTATTCCCCAGGATCTGAGCGGTTGAAGCTGTAGGCATTGGGGCAATAAGTAAACTG 31005342 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 31005341 TTTCTTATACCAT 31005329 Score = 111 bits (122), Expect = 2e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || |||| ||| |||||||| ||||| | || || || || || || || || | || Sbjct 30965875 CTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAAGATG 30965816 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| | Sbjct 30965815 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 30965756 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 |||| || || || || |||||| ||||| || |||||||||| Sbjct 30965755 TCTACCGTGGTGACCCCACTATATAAGCCTTGGATTACTTTCATGG 30965710 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || ||||| |||||||| ||||| | |||||||| || || Sbjct 30976463 GTGCCAGCATTGAAGAGAGTGGGAGAAGCATGAGTAAACCACCTCTCAGAAAGAAGGTTA 30976404 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 ||||||||||| | || || || || ||| ||||| ||||||| ||| | ||||||| Sbjct 30976403 TATGTTTCAATTGCAGCATCAATGTCTTCTTGGTGAATCCCTACAGAGACCCTCATCAAC 30976344 Query 77114 ATATGCTGAGGTCGTTC 77130 |||||||| |||| ||| Sbjct 30976343 ATATGCTGCGGTCTTTC 30976327 Score = 86.0 bits (94), Expect = 9e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| ||||||||||| ||||||| ||||||||||||||| |||||||| || ||| Sbjct 30995550 TCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACACATTAAAGAC 30995491 Query 76580 CACTC 76584 || || Sbjct 30995490 CAGTC 30995486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712864951277760