Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq46 123 2e-23 seq212 104 2e-17 seq96 95.1 9e-15 seq1870 89.7 4e-13 seq99 86.0 5e-12 seq51 86.0 5e-12 >seq46 Length=13992998 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || || ||| || ||||||||||| || Sbjct 3038137 CATACCACCCCTCAGGCGCAGGACCAGGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTC 3038078 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || |||||||| | | |||||| || | Sbjct 3038077 AGAAAGAGTGCGACCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGG 3038018 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||||| || ||| ||||| ||||| | | |||||||| || || Sbjct 3038017 AGGGATCCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTC 3037958 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| || || ||||| || || ||||| || |||||||||||||| Sbjct 3037957 CACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTTACGAAGATTTGCAT 3037907 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || ||||| ||||| || | Sbjct 3038608 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTTGACTCTTTCTGGATATTGTAGTCAGAA 3038549 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || || |||||||| || |||||||| | | |||||| || | ||| Sbjct 3038548 AGAGTACGACCATCTTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 3038489 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||| || || ||||| ||||| | | |||||||| || |||||| Sbjct 3038488 ATACCTTCTTTATCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 3038429 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 |||| || || ||||| || || ||||||||||| || Sbjct 3038428 TCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAA 3038391 >seq212 Length=2426081 Score = 104 bits (114), Expect = 2e-17 Identities = 155/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||| ||||| | ||||| ||| ||||||||| |||||||| || ||| || Sbjct 1901301 AGTCTTAACACAACATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAA--AGTA--CGT 1901246 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || ||||| || | | |||||||| | ||| | |||||| Sbjct 1901245 CCATCTTCCAGTTGCTTGCCTGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCC 1901186 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||||| || |||| || || | || ||| | || | || Sbjct 1901185 TTATCCTGGATCTTGGCCTTCACATTTTCTATCGTATCTGAGGGTTCAGCATCAAGAGTG 1901126 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||||||||| || ||||| || ||||| Sbjct 1901125 ATGGTCTTCCCCGTGAGGGTTTTTACGAAAATCTGCAT 1901088 >seq96 Length=8018273 Score = 95.1 bits (104), Expect = 9e-15 Identities = 166/238 (70%), Gaps = 9/238 (4%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || ||||||| | | ||||||||| || || || || |||||||||||||| Sbjct 7716930 ATGCCACCTCTCACACGAAGCACCAGGTGCAGGGTAGACTATTTCTGGATGTTGTAATCT 7716989 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | || ||| | || || ||||| || || ||||| |||| ||||||||| || | Sbjct 7716990 GAAAGAGTGCGGCCATCCTCGAGCTGTTTGCCTGCAAATATCAGACGCTGCTGGTCAGGT 7717049 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC 44286 || | || ||||| || || || |||| | ||| | |||||||| || ||| Sbjct 7717050 GGAATGCCCTCCTTATCTTGGAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGTTC 7717108 Query 44287 CACCTC-CACC------GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||| ||||| ||||| ||| | ||||||||||| ||||| ||||| Sbjct 7717109 GACCTCGGACCTCAAGGGTAATAGTCTTGCCCATCAGGGTCTTCACAAAGATCTGCAT 7717166 >seq1870 Length=3491 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| ||||| || | | ||||| ||| || ||| ||| || ||||||||||| || Sbjct 1004 CATTCCACCTCTGAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 1063 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 | || |||| | || ||||||||||||||||||||||||| | |||||| || Sbjct 1064 AGACAGGGTGCGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTC 1120 >seq99 Length=7922563 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| ||||| || | | ||||| ||| || ||| ||| || ||||||||||| || Sbjct 5179991 CATTCCACCTCTGAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 5180050 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 | || ||| | || ||||||||||||||||||||||||| | |||||| || Sbjct 5180051 AGACAGGGTACGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTC 5180107 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || ||||| || | | |||||||| | ||| | |||||||| ||| Sbjct 586245 AGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 586304 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| || |||| || || | || ||| ||||| | || || ||||| Sbjct 586305 ATCTTGGCCTTCACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTC 586364 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || ||||| || ||||| Sbjct 586365 CCCGTGAGGGTTTTTACGAAAATCTGCAT 586393 >seq51 Length=12882142 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || ||||| ||||| || | Sbjct 9170556 CCACCCCTCAGACGGAGGACCAGGTGTAGGGTTGACTCTTTCTGGATATTGTAGTCAGAA 9170497 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || | | || || | |||||| || |||||||| | | |||||| || | ||| Sbjct 9170496 AGAGTACCACCATCTTCAAACTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 9170437 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||| || || ||||| ||||| | | |||||||| || |||||| Sbjct 9170436 ATACCTTCTTTATCTTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACC 9170377 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || || ||||| || || ||| | || | |||||||||||| Sbjct 9170376 TCCAGGGTGATGGTCTTGCCAGTCAGGCTTTTTATGAAGATTTGCAT 9170330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359956209124281