Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq16 158 2e-33 seq14 122 1e-22 >seq16 Length=30363061 Score = 158 bits (174), Expect = 2e-33 Identities = 174/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 9253 GTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCAC 9312 ||||||||||||| ||||||| |||||||||||| || || || || || |||||| Sbjct 7416420 GTGGTCTGGAACAACCTCTCGTCATCCCATTCTGGATGCTCCTGCTTAAGCACGTCGCAC 7416361 Query 9313 ACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCA 9372 || ||||| ||||||| |||||||| |||||||||||||| || || || ||||| || Sbjct 7416360 ACTCTGTTATGTTCCCGAAGCCAGATTGTGGCGTACATCATCAGACCGGGCACCAGACCG 7416301 Query 9373 AAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATG 9432 || |||| || || ||||| | || || ||| || || | || || |||||||| Sbjct 7416300 AAGACCTCGTGCCCCACAGCAAACTTCAGGTGTTCAGGGACGTGAGGGGGGTAGATCATC 7416241 Query 9433 TGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCT 9484 | | || |||||||| | ||| ||||||| ||| || ||||| |||| Sbjct 7416240 TCTGCTTGAGTATCTTTGACTGTGGGAGGATACACTTCTCCATCAATTATCT 7416189 Score = 143 bits (158), Expect = 4e-29 Identities = 216/307 (70%), Gaps = 0/307 (0%) Strand=Plus/Minus Query 8279 TCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGA 8338 || ||||| ||| | || || ||||| ||||| || || | |||| ||||||||| Sbjct 7418313 TCTGGAACGTTGAATGAGGTAAAGGGACAGCCCTTCACATTATTGCAGATGAGAGACTGA 7418254 Query 8339 ATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAG 8398 || | || | |||| ||| || || || ||||| || || ||||| ||||||||| Sbjct 7418253 ATTGAGGCAGTGTTGATGATTTTAAAACCTACTTCTCCACCAAAAGTGCTCGGCTTCCAG 7418194 Query 8399 TACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAAC 8458 || | || || || || | || |||| || ||||| | |||||| || || || | Sbjct 7418193 TAGTCAGGAGAACATATAGCATTACCCATAAGTCCTTTCAAGGAGAATGGTGCTCCAACT 7418134 Query 8459 TCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTG 8518 || | ||| |||| || |||||||| | ||||| ||||||||||||| | | | Sbjct 7418133 TCCACCATGGTCTCCCCAAAGATGGCATCCGGACGAGGCTTTTCCACCAGAAGGGCAGGA 7418074 Query 8519 TACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTT 8578 || | ||||| ||| || ||||| || || ||||| || || ||||| || ||||| Sbjct 7418073 TAAAACTCCATAGCATCAACGTCACCATAGAGGGCTTCCAGCTCTGCAGCCATTTCCTTC 7418014 Query 8579 TCTCCTG 8585 ||||||| Sbjct 7418013 TCTCCTG 7418007 Score = 134 bits (148), Expect = 2e-26 Identities = 125/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| || || ||||| ||||| || || ||||| || | ||| ||| | || Sbjct 7415339 TCTTACCCCATGGCCTAGCCCTTTGGTGAAAGCTGGTCCTCGTGCAATATCTGTCTTGAA 7415280 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 ||| || || || ||||| ||| |||| || |||||||| || || |||||||||||||| Sbjct 7415279 AAATTGATGGGTAAAATGCTGGGCAAAGAACGCAAACATCAAATTTGTGCCCTGGGGATC 7415220 Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAAC 9807 ||| |||| | || | |||||| |||||||||||| Sbjct 7415219 GGGGATGAACTTTCTTCTTAGAAGAAGTTTTTCCACAAC 7415181 Score = 102 bits (112), Expect = 1e-16 Identities = 187/267 (70%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 8944 CTTACTCGGCCGGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGAGTC 9003 ||||| | || || |||||||| ||||| ||||| || | |||||| | || || | Sbjct 7416994 CTTACCCTTCCAGCAATTTGTTTGGTGAATGATTCAACAAACTGGGTCAGTCCATGTTCC 7416935 Query 9004 ATGAGTATGGAATTGTTGTAGACGAA--GTTAACGTAGTCATACTTTGTTTT-ATCAATC 9060 | | ||| || |||||||||| || ||| | |||| || || ||| | |||||| Sbjct 7416934 AGTAATATAGAGTTGTTGTAGATAAACTGTTGA--TAGTTGTA-TTGGTTGTCATCAATT 7416878 Query 9061 TCAAATGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATA 9120 | || | ||||||| || | |||||||||||| | |||||||||| | | ||| Sbjct 7416877 TGAACGGTGTCCGGCAGAAGGGGATGCCAGTGATAGAGTGTGTTAAACTCAGCAGCGATA 7416818 Query 9121 CGATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAGCTGAAA 9179 || |||||||||||||| | | ||| ||||| || || | |||| ||| | || Sbjct 7416817 CGGTTTTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGTTTGAA 7416759 Query 9180 ATGGTAGCCGCTGAGCTGCTGAACGTA 9206 || ||||| || || ||||| || || Sbjct 7416758 GTGATAGCCACTCAGGTGCTGTACATA 7416732 >seq14 Length=31380117 Score = 122 bits (134), Expect = 1e-22 Identities = 169/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408 ||||||| || || |||| || || || || ||||| |||||||||||| | || | Sbjct 25348659 TCTTGACAATGTTAAAGCCCATCTCGCCACCAAATGTGCTCGGCTTCCAGTACTCTGGAG 25348600 Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468 | |||||| ||| | | ||| ||||||||||| || || ||||| | ||||| || | Sbjct 25348599 AACAGATGGGGTTTCCTAGGAGACCTTTGAGGGAAAAGGGTGCCCCAATCTCGATCATAC 25348540 Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528 |||| || ||||| | ||| || || |||||||| || | || | ||| | ||| | Sbjct 25348539 TCTCCCCAAAGATAGAGTTCGGTAGGCACTTTTCCAGCAGCAGCCCTGGGTAGAACTCTA 25348480 Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585 || |||| |||||| || || || || || || || | |||||| ||||||| Sbjct 25348479 AGGCGTCGATGTCTCCATAGAGCTCCTCCAGCTCCGCTGCCACCTCCTTCTCTCCTG 25348423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716806967238720