Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq51 141 2e-28 seq21 111 4e-19 seq96 107 5e-18 seq99 91.5 4e-13 seq72 87.8 4e-12 >seq51 Length=12882142 Score = 141 bits (156), Expect = 2e-28 Identities = 166/222 (75%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| |||| ||| | |||| || || || || || |||||||| |||| Sbjct 9170322 AGGTCAAAATGC---AAATCTTCATAAAAAGCCTGACTGGCAAGACCATCACCCTGGAGG 9170378 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| ||||||||||||| || || ||||| || || |||||||| || Sbjct 9170379 TGGA--GCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAAGATAAAGAAGGTAT 9170436 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 |||||| |||||||| | || ||||| || || || ||| | |||||||| | ||||| Sbjct 9170437 CCCTCCTGACCAGCAGAGGCTCATCTTTGCTGGCAAGCAGTTTGAAGATGGTGGTACTCT 9170496 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | | || || || |||| ||||| ||||| || || || || Sbjct 9170497 TTCTGACTACAATATCCAGAAAGAGTCAACCCTACACCTGGT 9170538 >seq21 Length=25602908 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 177948 GGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAG 178007 || || || ||||| |||||| | ||| || || || || || || || || ||| Sbjct 20609700 GGGAAGACCATCACTCTCGAGATTGAACCCTTGGATACAATAGAAAATGTGAAGGCCAAG 20609759 Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067 || ||||| ||||||||||| ||||| || |||||| |||| || || || || || || Sbjct 20609760 ATCCAGGATAAAGAAGGAATTCCTCCTGATCAGCAAAGACTCATTTTTGCTGGCAAGCAA 20609819 Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTT 178127 || ||||||||| | ||| | | || || ||| | ||||| || || || || || ||| Sbjct 20609820 CTGGAAGATGGACGTACTGTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCACCTT 20609879 Query 178128 GTTTTGAGACT 178138 || || ||||| Sbjct 20609880 GTATTAAGACT 20609890 >seq96 Length=8018273 Score = 107 bits (118), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 7/213 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCT-------CGAGGTGGAAAG 177976 || || || ||||| || || | || || || || ||||| |||||| ||| Sbjct 7717163 CAGATCTTTGTGAAGACCCTGATGGGCAAGACTATTACCCTTGAGGTCCGAGGTCGAACC 7717104 Query 177977 CTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGA 178036 | |||||||| ||||| |||||| || || || || || || || || || || || Sbjct 7717103 CAGTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGATAAGGAGGGCATTCCACCTGA 7717044 Query 178037 CCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 |||||| || || || || || || ||||||||||| ||||| | |||||| | ||||| Sbjct 7717043 CCAGCAGCGTCTGATATTTGCAGGCAAACAGCTCGAGGATGGCCGCACTCTTTCAGATTA 7716984 Query 178097 TAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||| |||| ||| | || || ||||| || || Sbjct 7716983 CAACATCCAGAAATAGTCTACCCTGCACCTGGT 7716951 >seq99 Length=7922563 Score = 91.5 bits (100), Expect = 4e-13 Identities = 94/121 (78%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || || ||||| || || || || || || |||||||||||||| | ||| || | Sbjct 5181759 CAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTG--AGCCCAGTG 5181702 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| |||||| || ||||| ||||| ||||| || ||||||| Sbjct 5181701 ACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAGC 5181642 Query 178042 A 178042 | Sbjct 5181641 A 5181641 >seq72 Length=9996315 Score = 87.8 bits (96), Expect = 4e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995 ||||| || | |||||||| |||| ||| || | ||| ||||| | | || | Sbjct 7284982 AAAACCCTTATGGGAAAAACCGTCACTCTCCAGATTGAACCGTCAGATATACTAGAAAGT 7284923 Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 || || ||||| ||||| ||||||||||| |||| || |||||| |||| || | Sbjct 7284922 GTAAAGGCCAAGATCCAGGATAAAGAAGGAATTTCTCCTGATCAGCAAAGACTCATTCTT 7284863 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 || || || || || ||||||||| ||| | | || || ||| | ||| || || Sbjct 7284862 GCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGACTACAACATTTGAAAGGAGTCT 7284803 Query 178116 ACACTGCATCTTGTTTTGAGACT 178138 || || |||||||| || ||||| Sbjct 7284802 ACTCTTCATCTTGTGTTAAGACT 7284780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203611010072842