Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq46 98.7 9e-16 >seq46 Length=13992998 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || || ||| ||||| ||||| ||||| || || ||||| | || || Sbjct 3038115 ACCAGGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGACCATCCTCC 3038056 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||| || || || || | ||| ||||| | |||| | || || || ||| Sbjct 3038055 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATCCCT-TCTTTATCCTG 3037997 Query 41773 GATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 ||| || ||||| | | ||||| || | ||||||||||| || || || || Sbjct 3037996 GATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 3037937 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || ||||| || |||||||| || ||||| || Sbjct 3037936 GCCAGTCAGGGTTTTTACGAAGATTTGCATTTT 3037904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462258965811600