Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4 506 1e-138 seq2 425 4e-114 seq7 315 5e-81 seq6 141 7e-29 seq2750 132 3e-26 >seq4 Length=205426864 Score = 506 bits (560), Expect = 1e-138 Identities = 452/566 (80%), Gaps = 3/566 (1%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||| |||||||||||||||||||||| || |||| Sbjct 97805557 AAAACACCTTCATATTAATCATTCT---CATATACTTCAAATTTGTACTTGATGTGTTTC 97805613 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 | || || |||| ||| ||||||| ||| ||||| || |||||| |||||||| | Sbjct 97805614 CCCTCCTGGACATCAGAGAGAACACCTGGGTATTCAGGCAGAAGTTTATATTTCTCCAAG 97805673 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| ||||| |||||| ||||||| ||||||||| ||||||||||| |||||||| ||| Sbjct 97805674 TCAATTTCTGAAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAATAGT 97805733 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || | | | | |||| ||||| ||||| |||||||| || |||| |||||| Sbjct 97805734 TTAAGATGGCCTAGGTGATTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAA 97805793 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | ||||||||||||||||||||||||||| |||| ||||||||||| |||||||| ||| Sbjct 97805794 ATCATGTCTACTTTATTTGCTAATTCTGGTCGTTCAGTAAGTTTTAAGGCATCATCCAAA 97805853 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| | |||| | ||||| ||||| |||||||||| | | Sbjct 97805854 CTTCTGGCAAGAAAATGAGCTCCTTATGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 97805913 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | |||||||| || |||||||||||||| |||||||| ||||| ||||| Sbjct 97805914 TTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCC 97805973 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||||||| | |||||||||| | ||| ||||| || || |||||||| ||||||| Sbjct 97805974 ATAATCACCAGATTCTGTTTACCCTCTACTGAAGAAGTTGTGGTCATTCTCTGGAAATAC 97806033 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 | || |||||| | || |||| |||| || || | ||||| |||||||||||| Sbjct 97806034 CTGAATTCATTCCTGAGCGGCGGCCTGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTTT 97806093 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 || | ||||| || ||||||||||| Sbjct 97806094 TGGGACACAGCGACGATGCAGTTTAG 97806119 >seq2 Length=114371477 Score = 425 bits (470), Expect = 4e-114 Identities = 420/540 (78%), Gaps = 6/540 (1%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| |||||||||| ||||||||||||||||||||| | |||| Sbjct 84493122 AAAACACCTTCATATTAATCATTCTTCTCACGTACTTCAAATTTGTACTTAATGCCTTTC 84493063 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| | | | |||| ||| |||||| || || ||| |||||||| | | Sbjct 84493062 TCCTCCTGGACATCAAAGAAAACATCTGGGTATTCTGGCAGAAATTTATATTTCTCCAAA 84493003 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| || |||||||| || ||||| ||| Sbjct 84493002 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGTATGATCCTTGTGACAAATAGT 84492943 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTAT-ACACAGAACTACCTCCAATTATCCA 4193 |||||| || || | | |||| | ||| |||| | | ||||||||| |||| |||||| Sbjct 84492942 TTAAGACTGCTTGAGTGATTCATGGATTCCTTATAAAATAGAACTACCACCAACTATCCA 84492883 Query 4194 GACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAA 4253 | ||||||||||||||||||||||||||| | | |||||||||| |||||||| | Sbjct 84492882 AATCATGTCTACTTTATTTGCTAATTCTGGTTAT----TAAGTTTTAAGGCATCATCCAG 84492827 Query 4254 ACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAAC 4313 ||| | || | ||| ||| ||| ||||| || | ||| | || | |||||||| | Sbjct 84492826 ACTTCTTGCAAGAAATTGATCTCCTTGTGG-AGGTTCTTGTGGTCTCTCCTGAGAACTAA 84492768 Query 4314 ATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACC 4373 ||||||||| |||||||| || |||||||||||||| |||||||| |||| |||| Sbjct 84492767 ATTAATTCTATTCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGATCTTCCTACC 84492708 Query 4374 CATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATG 4433 ||||||||| |||||||||||| || ||| || || || || |||| ||| ||||||| Sbjct 84492707 CATAATCACCAAATTCTGTTTACCTTCTACTGAGGAGGTTGTGGTCACTCTCTGGAAATA 84492648 Query 4434 TTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTT 4493 | || |||||| | || |||||| |||| || || | ||||| ||||||||||| Sbjct 84492647 CCTGAATTCATTCCTGAGCGGTGGCCAGGGCAGGTCCCCGTTCTTGCCGATGCCCATGTT 84492588 >seq7 Length=173848474 Score = 315 bits (348), Expect = 5e-81 Identities = 292/369 (79%), Gaps = 1/369 (0%) Strand=Plus/Plus Query 4152 ACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATT 4211 |||||| ||||| ||||| |||||||| || |||| |||||| | |||||||||| |||| Sbjct 32008260 ACTCATGGCTTCCTTATAAACAGAACTGCCACCAACTATCCAAATCATGTCTACTCTATT 32008319 Query 4212 TGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATG 4271 |||||||||||| |||| ||||||||||| ||||| | ||| | || | |||||| Sbjct 32008320 TGCTAATTCTGGTTGTTAAGTAAGTTTTAAGATCTCATCCAGACTTCTGGCAAGAAAATG 32008379 Query 4272 AGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAA 4331 ||||| |||||| | ||||| ||||| ||||||||||| | ||||||||| | ||||| Sbjct 32008380 AGCTCGTTGTGGAGGTTCCTTGAGTTCTTTGCTGAGAACTAAATTAATTCTATCCTTTAA 32008439 Query 4332 AGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTG 4391 ||| || |||||| ||||||| |||||||| ||||| ||| || |||||| | |||||| Sbjct 32008440 AGGTCGATTCTTCCCAGGAATGGAGAACCAGGTCTTCCTACACAAAATCACCAGATTCTG 32008499 Query 4392 TTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCATAAG 4451 |||| || ||| ||||| | || |||||||| ||||||| |||| |||||| | || Sbjct 32008500 TTTACCTTCTACTGAAGAGATTGT-GTCATTCTCTGGAAATACCTAAATTCATTCCTGAG 32008558 Query 4452 TCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAACAAT 4511 ||||| |||| || || | ||||| ||||||||||| |||| ||||| || || Sbjct 32008559 CGGCGGCCAGGGCAGGTCGCCGTTCTTGCCGATGCCCATGTTCTGAGACACAGCGACGAT 32008618 Query 4512 GCAGTTTAG 4520 ||||||||| Sbjct 32008619 GCAGTTTAG 32008627 Score = 302 bits (334), Expect = 3e-77 Identities = 416/577 (72%), Gaps = 15/577 (3%) Strand=Plus/Plus Query 3963 TTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTG 4022 ||| ||||||| |||||| |||||||||||||||||||||||||||| |||||| || | Sbjct 65397658 TTTATATTAATCATTCTTTTCATATACTTCAAATTTGTACTTAATACCTTTCTCCTCCTC 65397717 Query 4023 CACATTAGAAAGAACACTT---GGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAA 4079 ||||| ||| | ||||| | || |||||| | |||||| |||||||||| |||| Sbjct 65397718 CACATCAGAGACAACACCTTGTGGGTATTCTGGGAGAAGTTTATATTTCTCTAAATCACC 65397777 Query 4080 TTCT---GGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTT 4136 |||| ||| |||| ||||||| || |||||| |||||||||| |||||||| | ||| Sbjct 65397778 TTCTAGGGGAGAAAACGTGTCACTTTGAAAGTCCTGCATGATCCATGTCACAAATAATTT 65397837 Query 4137 AAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGAC 4196 || || | | || |||| | ||| ||||| |||||||| ||||| | | | | | Sbjct 65397838 AAAATGGTCTCAAT---TCATGGATTCCTTATAAACAGAACTGCCTCCCACTGTAAAAAA 65397894 Query 4197 CATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACT 4256 || |||| |||||||||| ||| | | || || || ||||||| |||||| | | ||| Sbjct 65397895 CACGTCTTGTTTATTTGCTGATTTTAGTTGCTCAATACGTTTTAAGGCATCACCCAGACT 65397954 Query 4257 CTTAGCTAA-AAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACAT 4315 |||| || |||| ||| ||| || || | ||| | ||| | |||| ||| | || Sbjct 65397955 -TTAGTCAAGAAAAGGAGGTCTTTGCGGTGGTTCCCTGGATTCTCTACTGACAACTAAAT 65398013 Query 4316 TAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCA 4375 ||||| | |||||||| | |||||||||| ||| ||||||| |||| || | Sbjct 65398014 TAATTATATACTTTAAAGGTTGATTCTTCTCAGTAATCAAGAACCAGTTCTTCCTAATAA 65398073 Query 4376 TAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTT 4435 || |||||||| |||||| | | | ||||| | || |||||||||||||| | Sbjct 65398074 AAAATACTAAATTTTGTTTACCCTCTGCTGAAGAGGGTGTGGTCATTCTTTGGAA----T 65398129 Query 4436 TAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTT 4495 || | ||| | || || || |||| || || | || |||||||| || | Sbjct 65398130 CGAATTTATTTTTGAGCTGGGGTCAGGGCAGGTCCCCATTCCTGATGATGCCCATCTTCT 65398189 Query 4496 GAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 | | |||| |||||||||||||| | |||||||| Sbjct 65398190 GGGAAACAGTGACAATGCAGTTTAGCGGATGAACCAT 65398226 Score = 286 bits (316), Expect = 2e-72 Identities = 236/285 (83%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| |||||||| |||||||||||||||||||||||| | |||| Sbjct 57460084 AAAATACCTTCATATTAATCATTCTTCTTATATACTTCAAATTTGTACTTAATGCGTTTC 57460143 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || |||| ||| ||||||| || |||||| || |||||| |||||||| | | Sbjct 57460144 TCCTCCTGGACATCAGAGAGAACACCAGGGTATTCTGGCAGAAGTTTATATTTCTCAAAA 57460203 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTC-AAAGTCTTGCATGATCCTAGTCACAAACAG 4133 |||| |||||||||| | ||||||| ||| |||||| || |||||||| |||||||| || Sbjct 57460204 TCAATTTCTGGAAAACACGTGTCACTTTCAAAAGTCCTGAATGATCCTTGTCACAAATAG 57460263 Query 4134 TTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCA 4193 |||||||| || ||| | | ||| ||||| ||||| |||||||| || |||| |||||| Sbjct 57460264 TTTAAGATGGCCTGGGTGATTCACGGCTTCCTTATAAACAGAACTGCCACCAAGTATCCA 57460323 Query 4194 GACCATGTCTACTTTATTTGCTAATTCTGGCTGTTC-GGTAAGTT 4237 | ||| ||||||||||||||||||||||| ||||| | |||||| Sbjct 57460324 AATCATCTCTACTTTATTTGCTAATTCTGGTTGTTCAGTTAAGTT 57460368 Score = 206 bits (228), Expect = 2e-48 Identities = 191/242 (79%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990 |||| |||| | |||| ||| ||||| || || || || |||||||| || | ||| || Sbjct 53007731 AGCTCTTAGGCCACATGGTGGACAATCGGGGTGACACAGGTGCAGCCCACGGACACCAGT 53007672 Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050 |||||||| |||| || || || |||||| || || || | |||||| || || ||| Sbjct 53007671 ATCTTCTCCAGCCGGAAGGAGTTGGGGCAGTGTGGAGGCTCCCTGCGCAGGACCAGGATC 53007612 Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110 ||||| ||||| ||||| ||||||||||||||||| || ||||||||||| || | || Sbjct 53007611 TCTTGCTGGATGGGGACAGAGTTCATGTGGTAGTCCACGTTCCCATCAGCGTTGATGCAG 53007552 Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTG 27170 || |||| ||| |||||||| ||||| ||||||||||||||||| || | || |||||| Sbjct 53007551 CCCAAGTGGCGGCACTTTGCCTCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTG 53007492 Query 27171 CG 27172 || Sbjct 53007491 CG 53007490 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/197 (71%), Gaps = 9/197 (5%) Strand=Plus/Minus Query 27174 TGGAGAGTCCAAGGAGACGTAGATCTATTGTAGTAGTCTGAAGCCCTTTTAGAACTAGTA 27233 |||||| ||||||| || || |||| |||||||| ||||| | |||||| | | | ||| Sbjct 53006239 TGGAGATTCCAAGGTGAGGTGGATCGGTTGTAGTAATCTGAGGACCTTTTGGGATTGGTA 53006180 Query 27234 TT------CCAGTTACGGATGCTCAAAGTAACCATCACAGACCGTGGAAAGCTATTGTTA 27287 || || |||| ||||| ||| | |||||||||| ||| || ||| | |||| Sbjct 53006179 TTGGTATTCCGGTTATGGATGTTCAGGTTGACCATCACAGTCCGGGGGAAGTTCTTGTCC 53006120 Query 27288 GCAGC---TAAGCATCTTGGGGTTTGTGCGCTTGTTATTTCTGACTTTACTATACAATCT 27344 ||| | ||||| ||| || ||| | ||| ||| ||| ||| ||||| || Sbjct 53006119 TCAGAATTTGGGCATCCTGGATTTCGTGGGATTGCGATTCCTGCCTTCACTATGGCCTCC 53006060 Query 27345 ATGCTCAGCAGCAGAAG 27361 | |||||||||||| || Sbjct 53006059 AGGCTCAGCAGCAGTAG 53006043 >seq6 Length=183735486 Score = 141 bits (156), Expect = 7e-29 Identities = 107/126 (85%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| |||||||| || |||| |||||||||||||||||||||| ||||||||||||| Sbjct 34955332 TTATAAACAGAACTGCCACCAACTATCCAGACCATGTCTACTTTACTTGCTAATTCTGGT 34955273 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 ||||| ||||||||||| |||||||||| ||| | | | ||||||||||| |||||| Sbjct 34955272 TGTTCAGTAAGTTTTAAGGCATCATCTAGACTTCTGGAAAGAAAATGAGCTCCTTGTGGA 34955213 Query 4285 AGCTCC 4290 | ||| Sbjct 34955212 GGTTCC 34955207 Score = 134 bits (148), Expect = 1e-26 Identities = 103/122 (84%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4045 TATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCA 4104 || ||| || |||||| |||||||| | ||||| |||||||||||| ||||||| |||| Sbjct 34959365 TACTCTGGCAGAAGTTTATATTTCTCCAAATCAATTTCTGGAAAAAACGTGTCACTTTCA 34959306 Query 4105 AAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCT 4164 ||||||||||||||||| |||||||| |||||||||| || ||| | | |||| ||||| Sbjct 34959305 AAGTCTTGCATGATCCTTGTCACAAATAGTTTAAGATGGCCTGGGTGATTCATGGCTTCC 34959246 Query 4165 TT 4166 || Sbjct 34959245 TT 34959244 Score = 129 bits (142), Expect = 4e-25 Identities = 94/109 (86%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| |||||||||| | ||||||||| || |||||||| || ||||||||||| Sbjct 34943826 CTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTTTAAAGGTCGATTCTTCTCAGG 34943767 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| |||||||||||||| | |||||||||| || Sbjct 34943766 AATGGAGAACCAGGTCTTCTTACCCATAATCACCAGATTCTGTTTACCT 34943718 Score = 105 bits (116), Expect = 5e-18 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 34964162 AAAACACCTTCATATTAATCATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTC 34964103 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATAT 4047 || || || |||| ||| ||||||| ||| ||| Sbjct 34964102 TCCTCCTGGACATCAGAGAGAACACCTGGGTAT 34964070 >seq2750 Length=44035 Score = 132 bits (146), Expect = 3e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 41968 GCTGAAGGGCTGTTTAAAAGTTTTAGTTTACTTCTAGGAAAGGATGTCAGAGAATCTGGA 42027 || || ||||||||| | || ||| | || | || ||||||| ||||| || || Sbjct 28441 GCCGAGGGGCTGTTTCACAGCTTTGACCTGCTGGTGGGCAAGGATGCTAGAGAGTCGGGC 28382 Query 42028 GTAAAGTTTGAAGCCCTTCTTGGTGTCTACACTAATGCTACCCAATTTGTCAAGTTTCTA 42087 | |||||||||| || ||||| |||||||| || |||| ||||| || ||||| Sbjct 28381 ATCAAGTTTGAAGTGCTGCTTGGGGTCTACACGAACGCTATCCAATACGTGCGCTTTCTG 28322 Query 42088 GAGACTTCTCTTGCTGTAAGTTGTGTTAACACTGAGTTCAAAGACTTGAAAAGAATGACA 42147 ||||| | || ||||| ||||| ||||| || ||||||||| ||| | ||||| Sbjct 28321 GAGACGGCACTGGCTGTGTCCTGTGTGAACACGGAATTCAAAGACCTGAGTCGTATGACG 28262 Query 42148 GATGGAAAAATTCAATTTAAAATAAATGTGCCTACAATTGCTCATGGAGACGG 42200 ||||| || |||||||||| ||| || || ||||||||||| || || || Sbjct 28261 GATGGCAAGATTCAATTTAGAATCTCCGTCCCCACAATTGCTCACGGGGATGG 28209 Score = 86.0 bits (94), Expect = 5e-12 Identities = 189/280 (68%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 52442 ATAATTTCAGTAAACACTGAGTTAGCTACATGTTTTTGATGAGCTACATATCCAACATGT 52501 ||||||||||| || || | | || || ||||| ||||| || || || || | || Sbjct 16923 ATAATTTCAGTGAAGACGGCGGAGGCGACGTGTTTCTGATGGGCCACGTAGCCTATCTGC 16864 Query 52502 ATGTTTTCAACAGAAGTTA-ATAAC-ATACTGATAATTGCAACAACAATCCATGTTTTTC 52559 | ||| | ||| | | || | | ||||| || || || || ||||| || || | Sbjct 16863 ACGTTGG--AGAGATTTGAGATGATGAGGCTGATGATGGCCACGACGATCCAGGTCTTGC 16806 Query 52560 CATGTCTTCTTGGAATTAAAAATATACTTGCTTTCTGCTTAAAAATTTGAAGCATATCTG 52619 | || | ||||| || | ||| | || ||||||||||| || || || ||| | || Sbjct 16805 CGTGACGCCTTGGGATAAGAAACACGCTGGCTTTCTGCTTGAAGATGTGCAGCTTCTCCA 16746 Query 52620 GATCCATCTCCCTTAACCCAAAATATTCTTTAAAAATGTCGAAAAGTCTGTTTGTTGACT 52679 | ||||||| ||||||||| || ||| |||||||| | ||| ||| || Sbjct 16745 GCGTCATCTCCTCCAACCCAAAAGCACTTTGAAAGATGTCGAACATGGTGTCTGTAATCT 16686 Query 52680 CTGGAGACTTAATAGAAATTAAAAAATAAAATGTATGTAA 52719 || || || || ||||| | ||||||||||| ||||| Sbjct 16685 CTAAAGCTTTGATTGAAATCAGAAAATAAAATGAGTGTAA 16646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361205966156774