Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq17 104 2e-17
seq7 95.1 1e-14
>seq17
Length=90481686
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|||||||| || ||| | ||||| | ||||| || ||||| ||| ||| ||||||
Sbjct 60460178 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 60460119
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || ||| | | || | ||| || || ||||| ||||| | || |||
Sbjct 60460118 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 60460059
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| || ||||| |||||||| ||||| || ||||||||| ||| || | || |||
Sbjct 60460058 CAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTGACTAC 60459999
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
|||||||| ||||| ||||||||||| | |||||
Sbjct 60459998 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 60459964
>seq7
Length=173848474
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|||||||| || ||| | ||||| | | || || ||||| ||| ||| | ||||||
Sbjct 115442744 AAAATGCAGATTTTCGTGAAAACCCTTATGGAGAAGACCATCACCCTCGAGGCTGAACCC 115442803
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
|| ||| | | || | ||| || || ||||| ||||| | || |||
Sbjct 115442804 TTGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 115442863
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| |||||||| |||||||| || || |||||||||||| ||| || | || |||
Sbjct 115442864 CAGCAAAGACTGATCTTTGCTGGAAAGCAACTGGAAGATGGATGTACTTTGTCTGACTAC 115442923
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
| |||||| ||||| ||||||||||| | |||||
Sbjct 115442924 AGTATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 115442958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428282366175470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |