Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_001847.1 Length=135301 Score E Sequences producing significant alignments: (Bits) Value seq2750 87.8 2e-12 >seq2750 Length=44035 Score = 87.8 bits (96), Expect = 2e-12 Identities = 179/263 (68%), Gaps = 5/263 (2%) Strand=Plus/Minus Query 98200 CCCAGCCCAGGCTAGAGTGCGAGCCCGGCGCCCCGCTCCGCACGGTGAGCGAGGTGTTAA 98259 ||||||| | | | ||| ||||| ||| || | |||| || || |||||| | Sbjct 2156 CCCAGCCAATGTCTGCGTGTGAGCCGGGCTTGCCCTTTTGCACAGTCAGGATGGTGTTGA 2097 Query 98260 GCAGCAGCACGCCGCGGCGCGCCCAGTCCTCTAGGCAGCCGTGCGACGGCCGCG-GAGCT 98318 | |||| ||| || || ||||| | || || |||||||| ||| | | || || Sbjct 2096 GTAGCAACACTCCCTGGGAGGCCCACGCGTCCAGACAGCCGTGATCCGGGGGAGAGAACT 2037 Query 98319 CCGGGAAAGTTCTTCTGCACGGCAGCGTAGATGTTCTGGAGGCTGGGTGGGACCGGAACG 98378 |||| | | | || || | | | |||||||||| |||||||| || | || | | Sbjct 2036 CCGGCAGACT-CTGATGAAGTTCTGTGTAGATGTTCCTCAGGCTGGGGGGAATTGGGAAG 1978 Query 98379 CCGCGGTTCACGCTAAAAGCCAAGCCGTGGGCTTGCCCGCGGCTGTGATAGGGGTCCTGG 98438 ||| |||||| || |||| ||||| ||||| || | | ||||||||||||||| Sbjct 1977 CCGTATGCCACGCTGAATGCCAGGCCGTTTGCTTGACCTCCG---TGATAGGGGTCCTGG 1921 Query 98439 CCCAGAATGACAACCTTGATGTC 98461 |||| ||| || ||||| || || Sbjct 1920 CCCAAAATAACCACCTTAATATC 1898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432784202410268