Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq2750 295 6e-75
seq19 143 2e-29
seq4884 140 3e-28
seq4 105 6e-18
seq7 89.7 4e-13
>seq2750
Length=44035
Score = 295 bits (326), Expect = 6e-75
Identities = 732/1098 (67%), Gaps = 36/1098 (3%)
Strand=Plus/Minus
Query 42367 CATGCACATGAAGCTGTCCGCGCCGGGGTTCATCTGCCACGCAAAGCACAAGATTCACCC 42426
||||||||| ||| ||||| | || | || ||| || |||| |||||| |||||
Sbjct 25469 CATGCACATCAAGATGTCCCCCGTGGCCTATATTGCCCAGGCCAAGCTCAAGATCCACCC 25410
Query 42427 GGGCTTTGCGATGACCGCCGTCCGAACCGATGAGGTGTTGGCGGAGAACTTGCTATTTAG 42486
|| | || ||||||| ||| | ||||||||| | | | || ||| | | || ||
Sbjct 25409 CGGGGTGGCAATGACCGTGGTCAGGACCGATGAGATCCTCTCCGAAAACATCTTGTTCAG 25350
Query 42487 TGCCAGGGCCTCGACGTCCATGTTTTTAGGG-CAGCCATCGGTTATGCGTCGGGAAGTCA 42545
| | |||||||| || |||||||| | ||| | ||| || | | || ||||| | ||
Sbjct 25349 TTCTAGGGCCTCTACCTCCATGTTCATTGGGACCCCCAACG-TCAGCCGCCGGGAGGCCA 25291
Query 42546 GGGCGGACGCAGTCACGTTTGAGGTGAATCATGAGTTGGCATCGCTGGACATGGCGCTCG 42605
||| |||||| || || ||||||||| |||| || |||| || | |||| | ||||
Sbjct 25290 GGGTGGACGCGGTGACCTTTGAGGTGCATCACGAAATGGCCTCCATCGACACTGGGCTCA 25231
Query 42606 GTTATTCTTCCACCATCACGCCCGCCCACGTTGCGGCGATTACCTCGGACATGGGCGTTC 42665
| ||| ||| ||||| || || ||| || || || || || | |||||||| | |
Sbjct 25230 GCTATAGTTCGACCATGACCCCGGCCAGGGTGGCTGCCATCACTACAGACATGGGAATCC 25171
Query 42666 ACTGTCAGGACATGTTTCTCATGTTTCCCGGGGACTCGT------ACCAGGACAGGACCC 42719
|| || ||| | ||| | | ||||||| || | | | ||| ||||
Sbjct 25170 ACACCCAAGACTTCTTTAGCGTCTTTCCCGCCGAGGCCTTTGCCAATCAG--CAGG---- 25117
Query 42720 TCAACGACTACGTTAAACAAAAAGCCGGATGCCAACGATTCGGTGGTCCTGGCCAGATTC 42779
|||| |||||| | || || | || || || | ||| | | ||| |
Sbjct 25116 TCAATGACTACATCAAGGCCAAGGTGGGCGCTCAGCG---CAATGGGACG---CTGATCC 25063
Query 42780 GTGAGCCCGTCGCTTACGTTGCGGGGGTGCCGCACTCGGACAACATA---CCGGGTCTCA 42836
| || ||| | ||| | ||||| || | || | ||| | || || |||
Sbjct 25062 GGGACCCCAGGACATACCTGGCGGGTATGACTAAC---GTCAATGGAGCTCCAGGACTCT 25006
Query 42837 GCCACGGACAGCTGGCCACGTGTGAGATTGTTTTGACGCCCGTTACTGCAGACGTTACCT 42896
| || || |||| |||||| ||||||||| | |||| || || || |||||||| |||
Sbjct 25005 GTCATGGCCAGCAGGCCACCTGTGAGATTATCGTGACCCCGGTCACGGCAGACGTGGCCT 24946
Query 42897 ATTTTCAAACCCCCAACAGTCCCC--GGGGACGGGCATCCTGCGTGATCTCGTGTGACGC 42954
||||||||| ||||| ||||| | || || || |||||||| |||| |||||
Sbjct 24945 ATTTTCAAAAGTCCAAC--TCCCCAAGAGGGCGTGCTGCCTGCGTGGTCTCCTGTGAAAA 24888
Query 42955 GTACAACAACGAAAGCGCGGAACGTTTGCTCTTTGACCACTCCATCCCGGATTCTGCCTA 43014
||||| | || ||| || | | ||| |||||| ||| |||||| | |||||
Sbjct 24887 CTACAATCAGGAGGCCGCCGAGGGGCTCATCTATGACCATTCCCGTCCGGATGCCGCCTA 24828
Query 43015 CGAATACCGCACTACGGTTAACCCATGGGCGTCGCAGCAGGGCTCCCTCGGAGACGTGCT 43074
||| ||||| | || || ||||| ||||| || |||| ||| ||||| || ||| | |
Sbjct 24827 CGAGTACCGGAGCACCGTGAACCCCTGGGCCTCTCAGCTGGGTTCCCTGGGTGACATTAT 24768
Query 43075 GTACAACTCAACCTCGCGCCAGGTCGCAGTGCCAGGGATGTACAGTCCGTGTCGCCAGTT 43134
||||||||| ||| |||||| || || || || | ||||| || || || ||
Sbjct 24767 GTACAACTCCTCCTATCGCCAGACGGCCGTCCCGGGCCTCTACAGCCCTTGCCGAGCATT 24708
Query 43135 TTTCCACAAGGACGCTATTTTGCGTAACAATCGGGGCCTGAACACACTAGTCACGGAATA 43194
|||| ||||||| | | |||| ||||| |||| || ||| | |||| || ||
Sbjct 24707 TTTCAACAAGGAGGAGCTGCTGCGCAACAACAGGGGGCTCTACAACATGGTCAACGAGTA 24648
Query 43195 CGCGGCC--CGCCT-CACGGGAACGCCGGCGACCAGCGCGACGGACCTGCAGTACGTGGT 43251
| ||| ||||| ||| || |||||||||||| || || |||||| |||||
Sbjct 24647 --CAGCCAGCGCCTGGGTGGGCAC-CCGGCGACCAGCAACACCGAGGTGCAGTTTGTGGT 24591
Query 43252 GGTCAACGGAACGGATGTGTTTCTAGAACAACCGTGCCAGTTTCTACAAGAAGCGTTTCC 43311
| || || || || ||||| || || ||||| ||| || || || || ||||| ||
Sbjct 24590 GATCGCGGGGACTGACGTGTTCCTGGAGCAACCATGCAGCTTCCTTCAGGAGGCGTTCCC 24531
Query 43312 CACGCTCGCCGCCAGTCACAGGTCTCTGCTGGACGAATATATGTCGAATAAGCTCACGCA 43371
| | ||| | ||| |||| | || | || || | |||||| || | || ||
Sbjct 24530 CGCACTCTCGGCCTCCTCCAGGGCACTCATCGATGAGTTTATGTCTGTCAAACAGACCCA 24471
Query 43372 CGCCCCTGTGCACATGGGACATTATATGATTGAGGAAGTGGCCCCTATGAAAAGACTATT 43431
|||||| || || ||||| ||||| ||||| || ||||| || || |||| ||||
Sbjct 24470 CGCCCCCGTCCATTATGGACACTATATAATTGAAGAGGTGGCGCCGGTGCGAAGAATATT 24411
Query 43432 AAAGATCGGAAACAAGGT 43449
|||| | ||||| || ||
Sbjct 24410 AAAGTTTGGAAATAAAGT 24393
Score = 172 bits (190), Expect = 5e-38
Identities = 282/402 (70%), Gaps = 6/402 (1%)
Strand=Plus/Minus
Query 46498 GTCCCCCATTAGCTCCGTGGAGAATGCGCCTTCCaaaaaaaGATTAGTCGT-GCTCCGTA 46556
||| ||||| ||||| ||| || || || |||| ||| || || || || |||| |
Sbjct 20745 GTCTCCCATCAGCTCGGTGCTAAAGGCCCCGTCCAGAAAGAGGTTGGTGGTCGCTCGGAT 20686
Query 46557 CCGTCTCATCAATCGTAATATAGGCAGGAATATGCAGGCGGTAGCACGGGCACGCCACGA 46616
|| || || || || || | || ||||||||||| |||| ||||||| || |
Sbjct 20685 GTTGCTG-TCCATGGTGATGTAAGACGGGATATGCAGGCGAAAGCAGGGGCACGAGACCA 20627
Query 46617 CAGTGTCTTGCAAGTTAAAATCATCTTTATGATCCGGACATACGTAGTTCACCACGTTAA 46676
|||| |||| || |||||| | |||| ||| |||| || || | |||||||| |
Sbjct 20626 TGCTGTCCTGCATGTCAAAATCTTGCCTATGCTCCTGACACACATAACTTACCACGTTCA 20567
Query 46677 GCATCTTTTCGTGGGCGTCCTTCAAATTAAGTAAAAAACTAGTTGATTTGTCAGATGAGT 46736
||| | || || |||||||||| ||| | ||| || || | | ||| | ||||
Sbjct 20566 GCAGCCGCTCCTGAGCGTCCTTCAGCTTATAAAGAAAGCTGGTGGCCTGGTCGGCCGAGT 20507
Query 46737 TACTTGAGGATATAAAAATCAGTTTTGCGTCCTTTTGAAGCATAAAACCCAGAATCGCGG 46796
| || || || || || | || |||||||| ||||||||||| ||||| ||||| |
Sbjct 20506 TTACGGACGAGATGAAGATGATCTTGGCGTCCTTCTGAAGCATAAAGCCCAGGATCGCCG 20447
Query 46797 GGAGGGCATCTTTTTTAATGAAGTTCGCCTCGTCGATATATAGGAGGTGGAACGTCTGTC 46856
| ||||| || || || || ||||| ||||| || | | | | |||||| || ||||| |
Sbjct 20446 GCAGGGCCTCCTTCTTGATAAAGTTGGCCTCATCCACAAACAAGAGGTGAAATGTCTGCC 20387
Query 46857 CCCGGATGCTCTAAAGGCAAAGAAAAACACAAAACGAGTTAC 46898
|||| ||||||| || ||| | ||| | |||||||| ||
Sbjct 20386 CCCGAATGCTCTGAA---AAACAGAAAGA-GAAACGAGTCAC 20349
Score = 156 bits (172), Expect = 4e-33
Identities = 500/753 (66%), Gaps = 32/753 (4%)
Strand=Plus/Minus
Query 61149 CCGTTCTTGCCGTTTACCGTTTATCTAATTACGGGAACTGCTGGTGCTGGGAAAAGTACC 61208
|| ||| |||| ||| | | ||| | || ||||| || || || || || ||||| |||
Sbjct 5417 CCCTTCCTGCCCTTTTCAGCCTATGTGATCACGGGGACGGCGGGGGCGGGCAAAAGCACC 5358
Query 61209 AGCAT-ATCGGCCCTGTACCAAAATTTAAACTGCCTGATCACGGGCGCGACCACCATAGC 61267
||| | | | ||| | |||| | | |||||||| |||| || || || ||| | ||
Sbjct 5357 AGCGTTAGCTGCC-TCCACCACACGATGGACTGCCTGGTCACCGGAGCCACGACCGTGGC 5299
Query 61268 CGCACAGAACCTATCGC-GTCGCCTAAAGACGTTCTGTCCCACGATCTTCAGCGCTTTTG 61326
||| |||||||| || | | ||| || | | ||| ||||| ||| |||||| ||||
Sbjct 5298 CGCGCAGAACCTCTCCCAGACGCTCCGAGCC-TACTGCCCCACCGTCTACAGCGCCTTTG 5240
Query 61327 GCTTTAAGAGCCGACACATCAATAT-----AGCCG-TCAGAAAAGCTCAT--CAGACCGG 61378
| || |||||||| ||||| ||||| ||| | |||| | |||| | | |||
Sbjct 5239 GGTTCAAGAGCCGGCACATAAATATGACGCAGCGGGTCAGC---GGTCATGGCCGCTCGG 5183
Query 61379 AGC-CGTATCCATAGAGCAAATTCAGCAACAGGAGCTATCGAAGTATTGGCCGGTTATAG 61437
| || || | ||| | | |||| | ||| || | ||||| |||||||| |
Sbjct 5182 CGGACGCCACCCTGGAGGAGCTCCAGCGGCGGGACCTGGCCAAGTACTGGCCGGTGCTCT 5123
Query 61438 TGGACATTATGAAAGAGGTTATGGCGAAAAAACCCAATGGCATGTACGGGACTATATCCA 61497
|| || ||| | | | || || |||| || | |||| | |||||
Sbjct 5122 CCGATATAGCCGCCGAGTTCAGGCGGACCAAGCCCAGGGGGCTCTACGCGGGGGTATCCG 5063
Query 61498 ACGCGAATTTTGAAACCCTCTCGAGA-ATG-ACC--GGACCGTGTTTATGGACTTCCAAT 61553
| | || || |||| || || ||| ||| || | | | ||||| |||||
Sbjct 5062 GCCCCGCCTTCGAGGCCCTG-CGGGATATGCACCAGGGGCAGC---TCTGGACCACCAAT 5007
Query 61554 ATTATTGTAATCGACGAGGCCGGAACCCTGTCCTCTTACATACTCACCACCGTCGTGTTC 61613
| || || | ||||||||||| || || ||| |||| || ||| |||| || ||
Sbjct 5006 GTGATCGTGGTGGACGAGGCCGGGACGCTCTCCGTCCACATTCTGACCGCCGTGGTCTTT 4947
Query 61614 TTTTACTGGTTCCTAAACAGCTGGCTAAATACCCCTCTTTACCGCC-AGGGGGCGGTTCC 61672
| ||||||||| | ||| |||||| ||||| || ||||||| ||| || || ||
Sbjct 4946 TGCTACTGGTTCTTCAACGCCTGGCTGCGCACCCCCCTGTACCGCCGAGGCCGC-GTCCC 4888
Query 61673 GTGCATAGTATGCGTCGGTTCGCCAACGCAGACAAACGCGTTCCAGTCAACTTACAACCA 61732
|||||||| ||||| || || || || ||||| |||| || ||||| | | | |||
Sbjct 4887 CTGCATAGTCTGCGTGGGATCCCCGACCCAGACCGACGCCTTTCAGTCCTCCTTTAGCCA 4828
Query 61733 CGGGACGCAAAAGACGGAGATATCG-TCGTGCGAGAACATCCTAACATTCATGATAGGGA 61791
|| ||| || | |||| ||| |||||| |||||||| || ||| || | || |
Sbjct 4827 CGAGACCCAGGTCAACAAGAT-TCGCGAGTGCGACAACATCCTCACCTTCCTGGTGGGCA 4769
Query 61792 A--GAAGGTCGTATCTGAGTACGTACACTTGGAGAGAAACTGGGCGCTGTTTATAAACAA 61849
| ||| | || | ||||| || ||| | |||||||| || || || |||||
Sbjct 4768 ACCCCAGG--GCCTCGGCCTACGTGGACGTGGCCCGCAACTGGGCCCTCTTCATCAACAA 4711
Query 61850 CAAGCGCTGCACCGATCTGCAGTTCGGACACCT 61882
||||||||||||||| | ||||| || |||||
Sbjct 4710 CAAGCGCTGCACCGACGTCCAGTTTGGGCACCT 4678
Score = 145 bits (160), Expect = 7e-30
Identities = 247/353 (70%), Gaps = 10/353 (3%)
Strand=Plus/Minus
Query 59898 TCGAACTGCTCGTTGATCTGGTTCGTCAGGCATTTGAACACGGTATTTGAAACCTGTTTC 59957
|| || |||||||||||||| | |||||||| |||| || || || || |||| |||
Sbjct 6692 TCAAATTGCTCGTTGATCTGATCAGTCAGGCACTTGACGACCGTGTTGGAGACCTTCTTC 6633
Query 59958 CGGAGACCCTG---GGTCGTACTTTCCGTACCGGTCCCAAAGAGCTTGTTTTTGTCCACA 60014
|| ||||| || ||| || ||| | || ||||||||| ||| ||||||
Sbjct 6632 TTCAGTCCCTGCGCGGCCGT-CTCCCCGGGCTGG--CCAAAGAGCCGGTTGCGGTCCACC 6576
Query 60015 ATGTTTTGAGAGACGTCTGTGACGAAATCCTCAACAACGTCTGTTATGCCGCTCACTGTT 60074
| ||| | ||| |||| |||| ||| ||||| || ||||| || | |||||| | ||
Sbjct 6575 AGGTTGTTGGAGGCGTCCGTGATGAACTCCTCCACCACGTCCGTGACGCCGCTGATGGTC 6516
Query 60075 TTGTTCTCCGCGAGCTTTATCAGCAAGTTTAGGAGCTCCCTCTTGGGGTCGGTTTTTTGA 60134
|||||||||| ||| || | ||||| ||| || |||||| |||||||||| | ||
Sbjct 6515 TTGTTCTCCGAGAGTTTGACCAGCAGGTTCAGAAGCTCCTTCTTGGGGTCCTTGCGCTGC 6456
Query 60135 GACGATTGCTCTAAGCGAGCCAATATGTCTTTATACATG--TCGTTGCACGTGCTACCGA 60192
|| ||||| | | | |||| ||||| || |||||| ||| | |||| || |
Sbjct 6455 GAGTTCTGCTCCAGGTGGGCCAGGATGTCCTTGTACATGTCTCGCCCCCCGTG--GCCCA 6398
Query 60193 CCAGCGCTTTTAGAGGCGCGGTATTTAGTAACTGACATAACTTTGCGTGCTCC 60245
| | || || || || || || || || | ||| || | ||| |||||||||
Sbjct 6397 CGATGGCCTTGAGCGGGGCCGTGTTCAGGAGCTGGCAGATCTTGGCGTGCTCC 6345
Score = 141 bits (156), Expect = 8e-29
Identities = 402/615 (65%), Gaps = 2/615 (0%)
Strand=Plus/Minus
Query 39396 AGTCGGCAGCCAGCGGACTTTTTAAAAGTTTTCAACTGCTGTTGGGAAAAGACGCCAGGG 39455
|||| || ||| || || ||| | || ||| | |||||| |||| || || || || |
Sbjct 28449 AGTCAGCGGCCGAGGGGCTGTTTCACAGCTTTGACCTGCTGGTGGGCAAGGATGCTAGAG 28390
Query 39456 AGGGAGGAGTTCAATTTGAGGGTCTTTTGGGCGTGTATACCAACGTAATTCAGTTTGTGA 39515
|| || | | ||||| | || | || || || || |||| || || | |||
Sbjct 28389 AGTCGGGCATCAAGTTTGAAGTGCTGCTTGGGGTCTACACGAACGCTATCCAATACGTGC 28330
Query 39516 AGTTTCTGGAAACGTCGCTAGCGGTTGCGTGCGTTAACACCGAGTTTAAGGACCTCAAAC 39575
|||||||| ||| | || || || | || || ||||| || || || ||||| | |
Sbjct 28329 GCTTTCTGGAGACGGCACTGGCTGTGTCCTGTGTGAACACGGAATTCAAAGACCTGAGTC 28270
Query 39576 GAATGACGGATGGAAAAATTCAGTTTAAGGTATCTGTACCGACCATCGCGTATGGGGACG 39635
| ||||||||||| || ||||| |||| | || || || || || || | ||||| |
Sbjct 28269 GTATGACGGATGGCAAGATTCAATTTAGAATCTCCGTCCCCACAATTGCTCACGGGGATG 28210
Query 39636 GCAGGCGGCCCACAAAACAAAAACAATACATTATCATGAAGGCCTGCAATAAGCATCACA 39695
| ||| | |||| || || | |||| | | ||| ||| | || || ||||
Sbjct 28209 GAAGGAGACCCAGTAAGCAGCGGACCTTCATTGTGGTCAAGAATTGCCACAAACACCACA 28150
Query 39696 TTGGTGCCGAGATAGAGCTGTCGACTGAT-GACATCGAGCTGCTATTCATTGACAGAGAA 39754
| || | || || |||||||| | || | ||| | ||| | || || | ||
Sbjct 28149 TCAGTACGGAAATCGAGCTGTCCA-TGCTGGACCTGGAGATCCTGCACAGCATCCCCGAG 28091
Query 39755 ACCCCACTCGATTACACAGAATACGCCGGGGCCGTAAAGACGATTACCGCCTCTCTCCAG 39814
||||| |||| || | || |||| ||||| || ||||| | || | | || |||
Sbjct 28090 ACCCCTGTCGAATATGCGGAGTACGTGGGGGCTGTCAAGACCGTGGCCTCGGCCCTACAG 28031
Query 39815 TTTGGCGTGGACGCGCTGGAGAGGGGCCTGGTAGATACCGTATTGAATGTTAAGCTTAGG 39874
||||| || || || || ||||||||||| | | || || ||| || ||||| |
Sbjct 28030 TTTGGGGTCGATGCCCTAGAGAGGGGCCTCATCAACACGGTCCTGAGCGTAAAGCTCCGC 27971
Query 39875 TCCGCCCCGCCGATGTTTATTCTAAAAACACTATCAGACCCGGTCTACACCGAACGGGGT 39934
||||| || |||||||| || | || || | || || || |||||| ||||
Sbjct 27970 CATGCCCCACCCATGTTTATCCTGCAGACCCTGGCGGATCCCACCTTCACCGAGAGGGGG 27911
Query 39935 CTAAAGAAGGCTGTTAAGTCAGACATGGTGTCCATGTTCAAAAGCTACCTTATGGATAAC 39994
|| ||| |||| ||||| ||| | | |||||||||| || | || |||| |
Sbjct 27910 CTCTCCAAGACTGTCAAGTCTGACCTCATCGCCATGTTCAAGAGACATCTGCTGGAGCAT 27851
Query 39995 TCGTTTTTCCTCGAC 40009
|| || ||||| |||
Sbjct 27850 TCCTTCTTCCTGGAC 27836
Score = 107 bits (118), Expect = 2e-18
Identities = 116/152 (76%), Gaps = 4/152 (3%)
Strand=Plus/Minus
Query 50187 GAAAACGGCATTGGCGACGTGTTTTTGGTGGGCCACGTAACCCACGTGAACGTTTTCAAC 50246
||| ||||| |||||||||||| || ||||||||||| || | || ||||| |
Sbjct 16912 GAAGACGGCGGAGGCGACGTGTTTCTGATGGGCCACGTAGCCTATCTGCACGTTGGAGA- 16854
Query 50247 CGACGAGAGAAGA--ACGCTGATAATGGCGACCACGATCCATGTTTTCCCGTGACGACGC 50304
|| |||| || | |||||| ||||| || |||||||| || || |||||||| |
Sbjct 16853 -GATTTGAGATGATGAGGCTGATGATGGCCACGACGATCCAGGTCTTGCCGTGACGCCTT 16795
Query 50305 GGGATAACAAAAACGCTGGCTTTCTGCTTAAA 50336
||||||| ||| ||||||||||||||||| ||
Sbjct 16794 GGGATAAGAAACACGCTGGCTTTCTGCTTGAA 16763
Score = 104 bits (114), Expect = 2e-17
Identities = 283/428 (66%), Gaps = 8/428 (2%)
Strand=Plus/Minus
Query 64599 AGCCAGGGGAGACGGATGGCGCGCCTTGAGGACGAGATGTCTCTGTCCGTTTATCAGCGT 64658
|||||| ||||| || || | | | || || ||||| ||| ||| ||||| |
Sbjct 2308 AGCCAGAGGAGAGGGGTGCTGAGAGGTAAGAACCAGATGCTTCTTGGAGTTAATCAGTGA 2249
Query 64659 CGCCTTGTCTATAGCCTTTCTTCCCCACAGCATAAAAACGCAC-CTCTGAA--GCTTGGC 64715
|| |||||| ||||| |||||||||||||| |||||| || | || ||| |
Sbjct 2248 AGCTTTGTCTCCCGCCTTCGCACCCCACAGCATAAACACGCACGCTTTTAACCGCT---C 2192
Query 64716 AGAAAGGCAGCTTATTATGTAGCTGGTGAACCAATCCCAGCCAAGGTTGGCGTGTGACCC 64775
||| || | |||| || | || ||||| ||||||||| || |||||||| ||
Sbjct 2191 AGAGAGCAATGAGATTACGTGGTCAGTAAACCACGCCCAGCCAATGTCTGCGTGTGAGCC 2132
Query 64776 CGCCTTCCCTCTTTCCACCGTCAGAATGGTGTTTAAAAGCAGAACTCCCCGTTTTGCCCA 64835
| ||| || ||| ||| ||||| |||||||| | |||| |||||| | |||||
Sbjct 2131 GGGCTTGCCCTTTTGCACAGTCAGGATGGTGTTGAGTAGCAACACTCCCTGGGAGGCCCA 2072
Query 64836 ACAGTCTAAGCACCCGTGAGAAGGAGCGGTGAACCCAGGTACAGTATTGGCTATCTCTTT 64895
||| | || |||||| || | | |||| | || | | | | | ||| |
Sbjct 2071 CGCGTCCAGACAGCCGTGATCCGGGGGAGAGAACTCCGGCAGACTCTGATGAAGTTCTGT 2012
Query 64896 AAAAATATTTTTGAGGCTTGGAGGTATACTGTAGTCCGGA-GCAACGCTAAAGGCTAGTC 64954
| || || | ||||| || || || | || ||| | || ||||| || || || |
Sbjct 2011 GTAGATGTTCCTCAGGCTGGGGGGAATTGGGAAG-CCGTATGCCACGCTGAATGCCAGGC 1953
Query 64955 CGGTGGCTTGACCGCGATGGTAAGGATCCTGGCCAAGGATCACGACTTTAATATCCTCCG 65014
|| | |||||||| | || || || |||||||| | || || || |||||||| |
Sbjct 1952 CGTTTGCTTGACCTCCGTGATAGGGGTCCTGGCCCAAAATAACCACCTTAATATCGGAGG 1893
Query 65015 GTTCGCAA 65022
| ||||||
Sbjct 1892 GGTCGCAA 1885
Score = 84.2 bits (92), Expect = 2e-11
Identities = 124/176 (70%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 63073 GGGACTATGGGGTCAGCTCAAATTTAGCCATGACCATCGTAAAGGCACAGGGAATGTCGT 63132
|||||||||| ||||||| || ||||||||||||| | || || ||||| ||||
Sbjct 3432 GGGACTATGGCATCAGCTCTAAGCTAGCCATGACCATAGCCAAAGCCCAGGGGCTGTCTC 3373
Query 63133 TGGAGCGAGTAGCCGTAGTATTTGGGTCCCACAAGAACGTCCAGACAAGCCACGTGTATG 63192
| | ||| ||| | || || ||||| ||| || || | ||||||||||||
Sbjct 3372 TAAATAAAGTCGCCATCTGCTTCGGCAGCCACAGAAACATCAAGCCCGGCCACGTGTATG 3313
Query 63193 TAGCAATATCAAGGGCTGTTAACTCAAATTATTTGGTCATGGACAGCAACCCCCTT 63248
| ||| | || || || |||| |||| ||||||||||||| || ||||||
Sbjct 3312 TGGCACTGTCTAGAGCCCGGCACTCTAATTGCGTGGTCATGGACAGGAATCCCCTT 3257
>seq19
Length=77229886
Score = 143 bits (158), Expect = 2e-29
Identities = 130/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048
|||||||||||| ||| || |||| ||||| || |||||||||||||||||||| || |
Sbjct 17297813 TCAGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAG 17297872
Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108
| || |||||||||||||| | || |||||||||||||||||||||||||| |
Sbjct 17297873 GCACACCGAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCA 17297932
Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152
|||| || ||||| || | | || || ||||| || ||||||
Sbjct 17297933 CCACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGCGCCATC 17297976
>seq4884
Length=4766
Score = 140 bits (154), Expect = 3e-28
Identities = 442/677 (65%), Gaps = 20/677 (3%)
Strand=Plus/Minus
Query 12846 CCAGCTGCAGTTCGCCTACGACAAGCTCCGC-GCGAGCATCAACAAGGTGCTGGAGGAGC 12904
|||| | ||||| || |||||| || ||| || || || ||| |||||| || |
Sbjct 2105 CCAGATCCAGTTTGCGTACGACTCCCTGCGCCGCCAG-ATTAACCGCATGCTGGGCGACC 2047
Query 12905 TCTCCAGGGCGTGGTGCCGAGAACAGGTGAGGGACACCTACATGTGGTAC-----GAACT 12959
| | |||| ||||||| |||||| ||| | | || |||| | || ||
Sbjct 2046 TTGCGCGGGCCTGGTGCCTAGAACAAAAGAGACAGA-----ATATGGTGCTGAGGGAGCT 1992
Query 12960 GAGCAAGATTAACCCCACCAGCGTAATGACGGCGATATACGGGCGGCCGGTGTCGGCCAA 13019
|| |||||| || ||||||| ||| ||| | | |||||||| ||| ||||| |||||||
Sbjct 1991 GACCAAGATCAATCCCACCACCGTCATGTCCGGCATATACGGCCGGGCGGTGGCGGCCAA 1932
Query 13020 GTTCGTGGGCGACGCCATCTCCGTGACGGACTGCGTGGCGGTGGACCAGGCGTCCGTCAG 13079
| |||| |||| |||||||| | | ||||| | || ||||||| ||||||
Sbjct 1931 GCGTCTGGGGGACGTTATCTCCGTCTCCCAGTGCGTCCCCGTCAACCAGGCCACCGTCAC 1872
Query 13080 CATCCACAAGAGCCTCCG---CACGTCCACCCCGGGGATCTGCTACTCGCGCCCCCCGGT 13136
| | | ||||||| | || | || | || | || |||||||||||||||| |||
Sbjct 1871 CCTGCGCAAGAGCATGCGGGTCCCGGGCTCCGAGACCATGTGCTACTCGCGCCCCCTGGT 1812
Query 13137 CACGTTCAGGTTCCTCAACAGCACCACGCTGTTCAAGGGCCAGCTGGGACCCAGAAACGA 13196
| || || || ||||| ||||| | | | |||| |||||||| || |||||
Sbjct 1811 GTCCTTTAGTTTTATCAACGACACCAAGACCTACGAGGGGCAGCTGGGCACCGACAACGA 1752
Query 13197 GATCATACTGACGGACAACCAGGTGGAGGCGTGCAAAGAGACGTGCGAACACTACTTCAT 13256
|||| | || || | || | |||| ||||| | | ||| || | ||||||||
Sbjct 1751 GATCTTCCTCACCAAGAAGATGACGGAGTCGTGCCAGGCGACCAGCCAGTACTACTTCCA 1692
Query 13257 AGCGAGCAACGTAACCTACTACTACAAAGACTACGTCTTCGTGaaaaaaaTTAACACCTC 13316
| |||||| | | || |||| | ||||| | | | |||| || |
Sbjct 1691 GTCCGGCAACGAGATCCACGTCTACCACGACTATCACCACTTTAAAACCATCGAGCTGGA 1632
Query 13317 CGAGATATCCACCCTCGGTACGTTCATCGCCCTGAACCTGTCGTTTATAGAGAACATAGA 13376
|| || ||||||| || ||||||||||| ||| || | || |||||||| ||
Sbjct 1631 CGGCATCGCCACCCTGCAGACCTTCATCGCCCTAAACACCTCCCTCATCGAGAACATTGA 1572
Query 13377 TTTCAGGGTC-ATCGAGCTGTACAGCCGCGCGGAGAAAAAGCTGTCCGGGAGCGTTTTCG 13435
|| | ||| | ||||||||| |||| ||| | ||| | | | ||| || |
Sbjct 1571 CTT-TGCGTCGCTGGAGCTGTAC--TCGCG-GGACGAGCAGCGGGCATCCAACGTCTTTG 1516
Query 13436 ATATAGAAACCATGTTCAGGGAATACAACTACTACACGCAACGCCTGGCGGGACTCCGGG 13495
| | || ||| ||| |||| ||||||| | | |||| | | || || || ||
Sbjct 1515 ACCTGGAGGGCATCTTCCGGGAGTACAACTTCCAGGCGCAGAACATCGCCGGCCTGCGAA 1456
Query 13496 AGGACCTGGACAACACG 13512
|||| |||||||| ||
Sbjct 1455 AGGATTTGGACAACGCG 1439
>seq4
Length=205426864
Score = 105 bits (116), Expect = 6e-18
Identities = 192/281 (68%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022
|| || ||||| || | |||| || ||||| || ||||| | || ||||| | |
Sbjct 97805836 TTTAAGGCATCATCCAAACTTCTGGCAAGAAAATGAGCTCCTTATGGAGGTTCCTTGAGT 97805895
Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082
|||||||| | || | ||||||||| | | | ||| || ||||| ||||| |||||
Sbjct 97805896 TCTCTGCTGAGAACTAAATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAG 97805955
Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142
||||| || | | |||||||| |||| ||||| || ||| | || || | || |
Sbjct 97805956 AACCAGGTCTTCCTACCCATAATCACCAGATTCTGTTTACCCTCTACTGAAGAAGTTGTG 97806015
Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTT 3202
|||||| |||| |||||| | | ||| || || || ||||| |||| |||||
Sbjct 97806016 GTCATTCTCTGGAAATACCTGAATTCATTCCTGAGCGGCGGCCTGGGCAGGTCCCCGTTC 97806075
Query 3203 TTACCAATTCCTAATTGTTCATCAACTGCAACGATGCAGTT 3243
|| || || || | | || || || |||||||||||
Sbjct 97806076 TTGCCGATGCCCATGTTTTGGGACACAGCGACGATGCAGTT 97806116
>seq7
Length=173848474
Score = 89.7 bits (98), Expect = 4e-13
Identities = 180/264 (68%), Gaps = 5/264 (2%)
Strand=Plus/Plus
Query 2982 TTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTGCTCAAAATAATAT 3041
|||| || ||||| || |||| || || ||||| | |||| |||| | || | ||
Sbjct 32008364 TTCTGGCAAGAAAATGAGCTCGTTGTGGAGGTTCCTTGAGTTCTTTGCTGAGAACTAAAT 32008423
Query 3042 TAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCATGTTCTTTTCCCCA 3101
||||||| | | | ||| || ||||| |||| ||||| ||||| || | | | ||
Sbjct 32008424 TAATTCTATCCTTTAAAGGTCGATTCTTCCCAGGAATGGAGAACCAGGTCTTCCTACACA 32008483
Query 3102 TAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATTTTCTGAAAATACA 3161
||| |||| ||||| || |||| | || || | | | |||||| |||| ||||||
Sbjct 32008484 AAATCACCAGATTCTGTTTACCTTCTACTGAAGAGATTGT-GTCATTCTCTGGAAATACC 32008542
Query 3162 TCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTTTTACCAATTCCTAATTGTT 3221
| | ||| || || || |||||| |||| ||||| || || || || | ||||
Sbjct 32008543 TAAATTCATTCCTGAGCGGCGGCCAGGGCAGGTCGCCGTTCTTGCCGATGCCCA--TGTT 32008600
Query 3222 C--ATCAACTGCAACGATGCAGTT 3243
| | || || |||||||||||
Sbjct 32008601 CTGAGACACAGCGACGATGCAGTT 32008624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427722436295520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |