Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq24 122 6e-23
>seq24
Length=155392059
Score = 122 bits (134), Expect = 6e-23
Identities = 397/598 (66%), Gaps = 44/598 (7%)
Strand=Plus/Minus
Query 22345 ATGTACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGATCTTAGTACTGAT 22404
||||| |||||||| | || || || |||||| ||||||||||| || | ||
Sbjct 44584319 ATGTATAAGAAGGCGGAGGCTTCCTTCTGGACCACCGAGGAGGTGGACCTGTCCAAGGAC 44584260
Query 22405 GTACGCCATTGGACAGAAAAACTGA---CCGAGGCTGAGCGCAGGTTCATGTCTCACATA 22461
| || || ||| ||| | || |||||| || | || || || || |
Sbjct 44584259 ATTCGGCACTGG---GAATCCCCGAAGCCCGAGG---AGAGATATTTTATATCCCATGTT 44584206
Query 22462 CTGGCATTCTTTGCAATGGCA---GATGGCATTGTAGGCGACAACCTTGTGT-GCAATTT 22517
|||| ||||||||| ||| |||||||| ||| || || | ||| || ||||
Sbjct 44584205 CTGGTTTTCTTTGCA---GCAAGTGATGGCATAGTAAATGAAAATTTGGTGGAGCGATTT 44584149
Query 22518 CGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGTGGCAAT 22577
|| ||| | | | ||| |||||||| | ||||||||| || || | || ||
Sbjct 44584148 AGCCAAATAGTTC----AGATTACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCAT 44584093
Query 22578 GGAAAATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAGTAGCTAAAGAG-- 22635
|||||| |||||| |||||||||||| || || ||| ||| ||| | | |||||
Sbjct 44584092 GGAAAACATACATTCTGAAATGTATAGTCTCCTTATTGACAC-TTAC-ATC-AAAGATCC 44584036
Query 22636 -AATCAAGCCGCATTGTT-TTCA--GCAGCTGAAGATATGCCATGTGTTAA--AGCCAAG 22689
|| || | ||| | |||| || |||| ||||| ||||| || || | |
Sbjct 44584035 CAAAGAAAAGGAATTTCTCTTCAATGCCATTGAACG-ATGCCTTGTGTCAAGAAGGC--G 44583979
Query 22690 GCACAGTGGGCTGCACAATGGCTGAAT--GCCACACATAAGT---CTATCGCAACACGTC 22744
||| | ||||| | |||| || | ||| | | | |||| | | ||||
Sbjct 44583978 GCAGATTGGGC----CTTGTGCTGGATTGGGGACAAAGAGGCTACCTATGGTGA-ACGTG 44583924
Query 22745 TCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCT 22804
| | ||||| || || || |||||| || | |||||||| || ||||| | |||||||
Sbjct 44583923 TTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATATTCT 44583864
Query 22805 GGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTG 22864
|||| |||||||| || ||||| || | |||||||||| || | |||||| | |
Sbjct 44583863 GGCTCAAGAAACGAGGACTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAG 44583804
Query 22865 ACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922
| || ||| |||||||||| |||||||| || |||| | || ||| | |||||||
Sbjct 44583803 ATGAGGGTTTACACTGTGATTTTGCTTGCTTGATGTTCAAACACCTGGTACACAAACC 44583746
Score = 87.8 bits (96), Expect = 1e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|||||||| || ||| || | | |||||||| || ||||| |||||||||||
Sbjct 143817880 GCCTTTGCCTTGGTGGAAAGCACCTTCTTTTCTGGTTCTTTTGCATTGATATTCTGGCTC 143817939
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
||||||| || ||||| || | | |||||||| || | |||||| |||| ||
Sbjct 143817940 AAGAAACAAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGTGATGAG 143817999
Query 22870 GGTCTACACTGTGACTTTGCTTG 22892
||| |||||||| ||||||||||
Sbjct 143818000 GGTTTACACTGTTACTTTGCTTG 143818022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356188994432422
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |