Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_004065.1
Length=230278
Score E
Sequences producing significant alignments: (Bits) Value
seq2750 120 4e-22
>seq2750
Length=44035
Score = 120 bits (132), Expect = 4e-22
Identities = 170/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 151997 GACGTCGCCCACAACTGGGTCATGTTCATCAACAACAAGCGCTGCCTCGACCTCGAGTTC 152056
||||| |||| |||||||| | | ||||||||||||||||||||| |||| || ||||
Sbjct 4745 GACGTGGCCCGCAACTGGGCCCTCTTCATCAACAACAAGCGCTGCACCGACGTCCAGTTT 4686
Query 152057 GGCGACCTGCTCAAGCACATCGAGTTCGGGCTGCCCCTCAAGTCCGAGCACGTCGAGTAC 152116
|| |||| | ||| | |||||| ||| || ||| | | ||| | | | |||
Sbjct 4685 GGGCACCTCATGAAGACCCTCGAGTACGGCCTCGAGCTCTCGCCGGAGATCCTGGCCTAC 4626
Query 152117 CTCGACAGGTTCGTGCGCCCC--GCCGGCCTCATCAGGGACCCGGCGCACGCCATCGATG 152174
||||| | ||||| |||| | |||| ||||| |||||| ||||| | | |
Sbjct 4625 GTCGACCGCTTCGTCGTCCCCAGGGCGGC--CATCATGGACCCCGCGCAGTACGTGGGCT 4568
Query 152175 TCACCCGCCTCTTCATCTCGCACGCCGAGGTCAAGAGGTACTTCACGGCGCTCCACG 152231
||||| |||||| |||| |||||||||||||||| | | |||| | |||||||
Sbjct 4567 GGACCCGGCTCTTCCTCTCCCACGCCGAGGTCAAGACCTTCCTCACCACCCTCCACG 4511
Score = 105 bits (116), Expect = 1e-17
Identities = 167/231 (72%), Gaps = 14/231 (6%)
Strand=Plus/Minus
Query 132550 TGCTCCTCGCACACGTAGGATACCACGTTCAGCATGTCGAA---GGGCGCCGAGGTCAGC 132606
||||||| ||||| || |||||||||||||| | || | ||| | |||||
Sbjct 20597 TGCTCCTGACACACATAACTTACCACGTTCAGCA-GCCGCTCCTGAGCGTCCT--TCAGC 20541
Query 132607 TTCGTCAGGAAGCAGGTG--CTG-TCGCTCGTCGTGTTGGTCGACGAGATGAAGATGATC 132663
|| || |||| |||| ||| ||| | || ||| ||||||||||||||||||
Sbjct 20540 TTATAAAGAAAGCTGGTGGCCTGGTCG---GCCGAGTTTACGGACGAGATGAAGATGATC 20484
Query 132664 TTCGTCGTG-TTCTGGGCCAGGAAGCCCAGGATCGTGTTAAAGGCCTCCTTCTTGATGAA 132722
|| | ||| ||||| || ||||||||||||| | ||||||||||||||| ||
Sbjct 20483 TTGG-CGTCCTTCTGAAGCATAAAGCCCAGGATCGCCGGCAGGGCCTCCTTCTTGATAAA 20425
Query 132723 GTGTGCCTCGTCCACGATCAAGAGGTTGAAGTTCTGCCCGCGGATGCTCTG 132773
|| ||||| ||||| | |||||||| || ||||||| || ||||||||
Sbjct 20424 GTTGGCCTCATCCACAAACAAGAGGTGAAATGTCTGCCCCCGAATGCTCTG 20374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 736666981391520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |