Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq24 152 8e-32
>seq24
Length=155392059
Score = 152 bits (168), Expect = 8e-32
Identities = 494/755 (65%), Gaps = 19/755 (3%)
Strand=Plus/Minus
Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
|| ||| || ||| ||||| || ||| | ||||| || ||||| |||| ||||| |||
Sbjct 44584349 TTCCCCGTCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGG 44584290
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117
|| ||| ||||| || |||||||||||| | | ||||| | | | | ||
Sbjct 44584289 ACCACCGAGGAGGTGGACCTGTCCAAGGACATTCGGCACTGGGAATCCCCGAAGCCCGAG 44584230
Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177
||| || | |||||||| || || ||| |||||||| | ||||| || ||
Sbjct 44584229 ---GAGAGATATTTTATATCCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTA 44584173
Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTT 125236
|| || ||| || || ||||| ||| |||| | ||| |||| | || ||
Sbjct 44584172 AATGAAAATTTGGTGGAGCGATTTAGCCAAATAGTTCAG-ATTACAGAAGCCCGCTGTTT 44584114
Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296
|| || |||||||| || || ||| | || || |||||||| | || |||||
Sbjct 44584113 CTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTCCTTATTGA 44584054
Query 125297 CATGTACATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGC 125355
|| ||||| ||||| ||| | ||| || ||||| || || || || ||| |||
Sbjct 44584053 CACTTACATCAAAGATCC-CAAAGAAAAGGAATTTCTCTTCAATGCCATTGA-ACGATGC 44583996
Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGT 125415
| | | | || ||| | |||| | | ||||| | ||| | || || | |
Sbjct 44583995 CTTGTGTCAAGAAGGCGGCAGATTGGGCCTTGTGCTGGATTGGGGACAAAGAGGCTACCT 44583936
Query 125416 ACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTG 125475
| | || | | || || ||||| || ||||| |||||||||||||| ||| |||||
Sbjct 44583935 ATGGTGAACGTGTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTTTG 44583876
Query 125476 CGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGT 125535
| | || || ||||||||||| || ||||| ||||| || || ||| || ||
Sbjct 44583875 CATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACGTTTTCCAATGAAC 44583816
Query 125536 TTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATC 125595
|||| |||| ||||| |||||||||| |||| | | || || | ||| | |
Sbjct 44583815 TTATTAGCAGAGATGAGGGTTTACACTGTGATTTTG-CTTGCT--TGATGTTCAAACACC 44583759
Query 125596 TGCGTCCCGAGTGCAGATCCAGC-GATGAAAAGGTCATCAACATTGTAACCGATGCCGTG 125654
|| || | | | ||| | || || || || | | || | | | |||| ||
Sbjct 44583758 TG-GTACACA------AACCATCGGAGGAGAAAGTGAGAGAAATAATTATCAATGCTGTT 44583706
Query 125655 AGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGC 125714
|||||||||||| || || ||||| || | || || | | ||||| ||||| |||
Sbjct 44583705 CAGATAGAACAAGAATTCCTCACCGAGGCCTTGCCTGTGAAGCTCATTGGGATGAATTGC 44583646
Query 125715 AAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGA 125749
| |||||| | ||||| ||||||||||||||
Sbjct 44583645 ACTCTAATGAAGCAATACATTGAGTTTGTGGCAGA 44583611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740964029472240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |