Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq24 152 8e-32 >seq24 Length=155392059 Score = 152 bits (168), Expect = 8e-32 Identities = 494/755 (65%), Gaps = 19/755 (3%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 || ||| || ||| ||||| || ||| | ||||| || ||||| |||| ||||| ||| Sbjct 44584349 TTCCCCGTCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGG 44584290 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || ||| ||||| || |||||||||||| | | ||||| | | | | || Sbjct 44584289 ACCACCGAGGAGGTGGACCTGTCCAAGGACATTCGGCACTGGGAATCCCCGAAGCCCGAG 44584230 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 ||| || | |||||||| || || ||| |||||||| | ||||| || || Sbjct 44584229 ---GAGAGATATTTTATATCCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTA 44584173 Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTT 125236 || || ||| || || ||||| ||| |||| | ||| |||| | || || Sbjct 44584172 AATGAAAATTTGGTGGAGCGATTTAGCCAAATAGTTCAG-ATTACAGAAGCCCGCTGTTT 44584114 Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 || || |||||||| || || ||| | || || |||||||| | || ||||| Sbjct 44584113 CTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTCCTTATTGA 44584054 Query 125297 CATGTACATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGC 125355 || ||||| ||||| ||| | ||| || ||||| || || || || ||| ||| Sbjct 44584053 CACTTACATCAAAGATCC-CAAAGAAAAGGAATTTCTCTTCAATGCCATTGA-ACGATGC 44583996 Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGT 125415 | | | | || ||| | |||| | | ||||| | ||| | || || | | Sbjct 44583995 CTTGTGTCAAGAAGGCGGCAGATTGGGCCTTGTGCTGGATTGGGGACAAAGAGGCTACCT 44583936 Query 125416 ACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTG 125475 | | || | | || || ||||| || ||||| |||||||||||||| ||| ||||| Sbjct 44583935 ATGGTGAACGTGTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTTTG 44583876 Query 125476 CGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGT 125535 | | || || ||||||||||| || ||||| ||||| || || ||| || || Sbjct 44583875 CATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACGTTTTCCAATGAAC 44583816 Query 125536 TTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATC 125595 |||| |||| ||||| |||||||||| |||| | | || || | ||| | | Sbjct 44583815 TTATTAGCAGAGATGAGGGTTTACACTGTGATTTTG-CTTGCT--TGATGTTCAAACACC 44583759 Query 125596 TGCGTCCCGAGTGCAGATCCAGC-GATGAAAAGGTCATCAACATTGTAACCGATGCCGTG 125654 || || | | | ||| | || || || || | | || | | | |||| || Sbjct 44583758 TG-GTACACA------AACCATCGGAGGAGAAAGTGAGAGAAATAATTATCAATGCTGTT 44583706 Query 125655 AGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGC 125714 |||||||||||| || || ||||| || | || || | | ||||| ||||| ||| Sbjct 44583705 CAGATAGAACAAGAATTCCTCACCGAGGCCTTGCCTGTGAAGCTCATTGGGATGAATTGC 44583646 Query 125715 AAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGA 125749 | |||||| | ||||| |||||||||||||| Sbjct 44583645 ACTCTAATGAAGCAATACATTGAGTTTGTGGCAGA 44583611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740964029472240