Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq2750 100 3e-16 >seq2750 Length=44035 Score = 100 bits (110), Expect = 3e-16 Identities = 176/256 (69%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 99506 CCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTCCGCACGGTGAGCGAGGTGTTGA 99565 ||||||| | | ||||| ||||| ||| || | |||| || || |||||||| Sbjct 2156 CCCAGCCAATGTCTGCGTGTGAGCCGGGCTTGCCCTTTTGCACAGTCAGGATGGTGTTGA 2097 Query 99566 GCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCGTGCTGCGGCCGCGGGGTCC 99625 | |||| ||| || || ||||| || ||||| |||||||| | ||| | | | | Sbjct 2096 GTAGCAACACTCCCTGGGAGGCCCACGCGTCCAGACAGCCGTGATCCGGGGGAGAGAACT 2037 Query 99626 CGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCTGGGCGGGATCGGAACGC 99685 | || | ||| || | | | |||||||||| |||||||| || || || | || Sbjct 2036 CCGGCAGACTCTGATGAAGTTCTGTGTAGATGTTCCTCAGGCTGGGGGGAATTGGGAAGC 1977 Query 99686 CGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGGTAGGGGTCCTGGC 99745 || ||||||||| |||||||||| || || || | ||| ||||||||||||| Sbjct 1976 CGTATGCCACGCTGAATGCCAGGCCGTTTGCTTGACCT---CCGTGATAGGGGTCCTGGC 1920 Query 99746 CCAGGATGACGACCTT 99761 ||| || || ||||| Sbjct 1919 CCAAAATAACCACCTT 1904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440842577520240