Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_006151.1
Length=143461
Score E
Sequences producing significant alignments: (Bits) Value
seq2750 120 3e-22
>seq2750
Length=44035
Score = 120 bits (132), Expect = 3e-22
Identities = 320/483 (66%), Gaps = 8/483 (2%)
Strand=Plus/Minus
Query 89938 CAGCAACGTCATCGTGATCGACGAGGCCGGGCTGCTCGGGCGGCACCTGCTCACGGCCGT 89997
|| ||| || |||||| | |||||||||||| |||| ||| | || || |||||
Sbjct 5013 CACCAATGTGATCGTGGTGGACGAGGCCGGGACGCTCTCCGTCCACATTCTGACCGCCGT 4954
Query 89998 CGTCTACTGCTGGTGGCTGATCAACGCCGCG-TACGACACGACGCAGTACGCGGCNNNNN 90056
|||| |||| ||| | |||||||| | | || ||| | | |||| || |
Sbjct 4953 GGTCTTTTGCTACTGGTTCTTCAACGCCTGGCTGCG-CACCCCCCTGTAC-CGCCGAGGC 4896
Query 90057 NNNNNNNNGTGC-TCGTCTGTGTGGGCTCGCCCACGCAGACGGACTCGCTCGAGTCGCGC 90115
||| | ||||| ||||| || || || ||||| ||| | | |||| |
Sbjct 4895 CGCGTCCCCTGCATAGTCTGCGTGGGATCCCCGACCCAGACCGACGCCTTTCAGTCCTCC 4836
Query 90116 TTCGAGCACGCGCGGCAGCTGTGCCGCGTGCGCGCCAGCGAGAACCTGCTCACGTACCTG 90175
|| |||| | ||| | | | |||| |||| ||| | ||||| | ||||
Sbjct 4835 TTTAGCCACGAGACCCAGGTCAACAAGATTCGCGAGTGCGACAACATCCTCACCTTCCTG 4776
Query 90176 ATCACCAACCGC-GCGCTGCGCGAGTACACGGACCTCTCGCGCAACTGGGCCATCTTCAT 90234
| ||||| | | || || | ||| |||| | | |||||||||||| |||||||
Sbjct 4775 GTGGGCAACCCCAGGGCCTCG-GCCTACGTGGACGTGGCCCGCAACTGGGCCCTCTTCAT 4717
Query 90235 CAACAACAAGCGCTGCCAGGAGTACGAGTTCGGCGAGCTCATGAAGGCGCTCGAGTACGG 90294
|||||||||||||||| || | |||| || | ||||||||| | |||||||||||
Sbjct 4716 CAACAACAAGCGCTGCACCGACGTCCAGTTTGGGCACCTCATGAAGACCCTCGAGTACGG 4657
Query 90295 CCTCCCGCTGACGGACGAGCACCTGCGCCT-CGTCGACAGCTTCGTGGTGCCCGAGGCCT 90353
|||| ||| || ||| |||| |||| ||||||| ||||||| || ||| |||
Sbjct 4656 CCTCGAGCTCTCGCCGGAGATCCTG-GCCTACGTCGACCGCTTCGTCGTCCCCAGGGCGG 4598
Query 90354 ACATCAACAACCCGGCGAACCTGCAGGGCTGGACGCGCCTGTACTCGTCGCACCGCGAGG 90413
||||| |||| ||| | ||||||||| || || | | || ||| |||||
Sbjct 4597 CCATCATGGACCCCGCGCAGTACGTGGGCTGGACCCGGCTCTTCCTCTCCCACGCCGAGG 4538
Query 90414 TCA 90416
|||
Sbjct 4537 TCA 4535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 458888259705840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |