Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 1e-13 >seq13 Length=135337776 Score = 91.5 bits (100), Expect = 1e-13 Identities = 167/244 (68%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 26752 CTTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCA 26811 |||||| || | |||| |||| | ||||| || || | ||||| || | |||||| Sbjct 126789772 CTTTTTTGTTAGACAA--TGCAGATCTTTGTGAAGACTCTGACTGGTAAGACCATCACCC 126789715 Query 26812 TCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAG 26871 |||| | || | | |||||||||||| | ||||| |||||| || || |||| Sbjct 126789714 TCGAGGTTGAGCCCAGTGACACCATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAG 126789655 Query 26872 GGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA 26931 | || ||||| || || || || | || | | ||| ||||| || ||||||| | | | Sbjct 126789654 GCATCCCTCCTGACCAGCAGAGGTTGATCTTTGCCGGAAAACAGCTGGAAGATGGTCGTA 126789595 Query 26932 ACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAG 26991 | | ||||| ||||| || ||||| || || | || ||||| || | || |||| Sbjct 126789594 CCCTGTCTGACTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTCCGTCTCAGAG 126789535 Query 26992 GAGG 26995 | || Sbjct 126789534 GTGG 126789531 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || ||| | ||||| || | |||||| | || | || | | Sbjct 126789529 ATGCAAATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 126789470 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | |||||| |||||| ||||| ||||| || ||||| || || Sbjct 126789469 GACACCATCGAGAACGTCAAAGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 126789410 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | | || ||||| || ||||||| | | | | ||||| ||| Sbjct 126789409 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 126789350 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || || ||||| || ||| | || |||||||| Sbjct 126789349 ATCCAGAAAGAGTCCACTCTGCACTTGGTCCTG 126789317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478600927781280