Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_007653.1 Length=156487 Score E Sequences producing significant alignments: (Bits) Value seq2750 120 3e-22 >seq2750 Length=44035 Score = 120 bits (132), Expect = 3e-22 Identities = 326/480 (68%), Gaps = 28/480 (6%) Strand=Plus/Plus Query 14919 ACCTCCTTGTGCGAGGAGAACAGCCGCGTCCA-CCCGGGCAGGTTCGCGGGGTTGGTGAT 14977 ||||| ||| ||| ||| ||||| ||||| ||| | | | |||||||| |||| Sbjct 4537 ACCTCGGCGTGGGAGAGGAAGAGCCGGGTCCAGCCCACGTAC-TGCGCGGGGTCCATGAT 4595 Query 14978 GAA-GCTCTCGGGCACCACGAAGCGGTCGACGAACTGCATGTGCTCCTCGGTCAGGGGCA 15036 | || || ||| || ||||||||||||||| | || | |||| | || | Sbjct 4596 GGCCGCCCTGGGG-ACGACGAAGCGGTCGACGTAGGCCAGGATCTCCGGCGAGAGCTCGA 4654 Query 15037 GGCCGTACTCGAGCGCCTTCATGAGGTTGCCGAACTCGTGCTCCACGCACCGCTTGTTGT 15096 ||||||||||||| | ||||||||||| || |||| | || ||| |||||||||| Sbjct 4655 GGCCGTACTCGAGGGTCTTCATGAGGTGCCCAAACTGGACGTCGGTGCAGCGCTTGTTGT 4714 Query 15097 TGATGAAGATGGCCCAGCTCCGCGGCAGCCGCACGTACTCCCGCAGG--GTGCGGTTGCA 15154 ||||||||| ||||||| | || | || |||||| || ||| || |||||| Sbjct 4715 TGATGAAGAGGGCCCAGTTGCGGGCCACGTCCACGTAGGCC--GAGGCCCTGGGGTTGCC 4772 Query 15155 GATGAGGTACGTGAGCACGTTCTCGCTCTGGCGGATC--GAGCACCGGAGCTTCTGGTGC 15212 | ||| | ||||| | ||| |||| || ||| ||| | ||| | | ||| ||| Sbjct 4773 CACCAGGAAGGTGAGGATGTTGTCGCACTCGCGAATCTTGTTGACCTGGG--TCTCGTGG 4830 Query 15213 TCGAACGTCGACTCCA--GCGACGCCGTCTGCGTGGGCGAGCCCACGCAGACCA-GCACG 15269 || | |||| | ||| || ||||| || || || ||||||||||| | ||| | Sbjct 4831 CTAAAGGAGGACTGAAAGGCGTCG--GTCTGGGTCGGGGATCCCACGCAGACTATGCAGG 4888 Query 15270 GGCCGCAGCCCGGCCGCGTACTGCGGCGTGTGGTACAGC---GCGTTGGTCATCCACCAG 15326 || ||| ||| | || |||| | || ||| | |||| |||||| | ||| || Sbjct 4889 GGACGCGGCCTCGGCG-GTACAGGGGGGTGCG---CAGCCAGGCGTTGAAGAACCAGTAG 4944 Query 15327 CAGTACACCACGGCCGTCAGCAGGTGCCGCCCCAG-GAG-CCCCGCCTCGTCGATCACGA 15384 || | |||||||| ||||| | ||| | | || | | ||| |||||||| | ||||| Sbjct 4945 CAAAAGACCACGGCGGTCAGAATGTG--GACGGAGAGCGTCCCGGCCTCGTCCACCACGA 5002 Score = 104 bits (114), Expect = 2e-17 Identities = 208/305 (68%), Gaps = 20/305 (7%) Strand=Plus/Plus Query 34949 CGGCCTCATGGCCCCCGAGCTCTACGTGTACGTGGACCCCGCCTTCACCGCCAACACGCG 35008 ||| | | ||||| || ||||||||||||||||| || |||| ||| |||||| Sbjct 20847 CGGGCGCCTGGCCTCCTCCCTCTACGTGTACGTGGATCCGGCCTATACCAACAACACCTC 20906 Query 35009 CGCCTCGGGCACCGGGATCGCGGCCGTGGGCCGCTACCG--CGA---CGAC----TTCAT 35059 |||||| |||||||| ||||| |||||| || | || | ||| |||| |||| Sbjct 20907 CGCCTCCGGCACCGGCATCGCCGCCGTGACCCACGACAGGTCGAACCCGACCAGGGTCAT 20966 Query 35060 CGTCTTCGCCCTGGAGCACTTCTTCCTGCGGGCCCTCACGGGCTCGGCCGCCGAGGACAT 35119 |||| | | |||||| |||||||||||| || ||| ||||| |||||| | || Sbjct 20967 CGTCCTAGGCCTGGAACACTTCTTCCTGAAGGACCTGACGGGGGACGCCGCCCTCCAGAT 21026 Query 35120 CGCGCGCTGCGCCGCGCACAGCCTGACGCAGGTCCTGGCCCTCCACCCCGGGGTGTTCCG 35179 ||| ||||||| | | | | | | || | | || |||||| || | Sbjct 21027 CGCCACGTGCGCCGTGGCCCTCATCTCCTCGATCGTCACGCTGCACCCC--CACTTTGAG 21084 Query 35180 CAGCGTCCGCG----TGGCGGTGGAGGGCAACAGCAGCCAGGACTCGGCCGTCGCCATCG 35235 || ||| | || |||||||||||||| ||||||||||| || || ||||||| Sbjct 21085 GAG-----GCGAAGATAGCAGTGGAGGGCAACAGTAGCCAGGACTCTGCGGTAGCCATCG 21139 Query 35236 CCGCC 35240 || || Sbjct 21140 CCTCC 21144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500566106540880