Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
seq9876 96.9 3e-15
seq17 96.9 3e-15
>seq2
Length=114371477
Score = 107 bits (118), Expect = 2e-18
Identities = 170/243 (70%), Gaps = 3/243 (1%)
Strand=Plus/Minus
Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065
||||||| | || ||||| || | || | ||||||||| || || |||||||| ||
Sbjct 110580064 AGCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAG 110580005
Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125
| ||||| || || |||||||||||||| |||| | | ||||||||| ||||
Sbjct 110580004 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAG 110579945
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| ||||| || || ||| || ||| | | || | || || ||| ||| |
Sbjct 110579944 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCA 110579885
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA---TGACTTATT 131242
|| | ||| | ||| || ||||| || ||||| ||||| ||||||| |||| || |
Sbjct 110579884 CCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATCTGCATTTTGACCTAGT 110579825
Query 131243 TTA 131245
|||
Sbjct 110579824 TTA 110579822
>seq9876
Length=376000
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | || |||||| || | ||| | ||||||||| || || |||||||| ||
Sbjct 278179 CCACCTCTCAGACGCAGGACCAGATGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 278120
Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || | || || |||||||||||||| |||| | ||||||||| | ||
Sbjct 278119 AGACTGCAGCCA-TCTTCCAGCTGCTTGCCTGCAAAGATGAGCTTCTGCTGGTCATG-GG 278062
Query 131127 GATT-CCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| |||||||| || |||||| ||||| | || | ||| | ||| ||| |
Sbjct 278061 GATTGCCTTCTTTATCTTGGATTTTGGCCTTGACATTTTCGATAGTGGCACTGGGCTCCA 278002
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | | | || ||||| || ||||| ||||| ||||||||
Sbjct 278001 CTTCAAGGGTGATGATCTTGCCGGTAAGGGTTTTCACGAAGATCTGCAT 277953
>seq17
Length=90481686
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081
|| ||| | ||| | || |||||||||||||| ||||| || || || || ||
Sbjct 60459963 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 60460022
Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141
|| ||||||||||| || |||| | | |||||| || ||||| |||||||| || ||
Sbjct 60460023 TTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 60460082
Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201
||| || ||| | | || | ||||| | || || | |||| ||| | |||
Sbjct 60460083 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 60460142
Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || || ||||| ||||||||||||||
Sbjct 60460143 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 60460175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471952181756160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |