Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq8 127 2e-24
seq10 122 7e-23
seq15 118 9e-22
seq13 109 5e-19
seq9 109 5e-19
seq4 109 5e-19
seq17 91.5 1e-13
seq24 82.4 6e-11
>seq8
Length=162613886
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||| || || || || |||
Sbjct 25942058 AGATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCCA 25941999
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| || || |||| |||||||||||||||||||| ||||||| || |
Sbjct 25941998 GTGACACCACTGAGAATGTCAAGGCCAAAATTCAAGACAAGGAGGGCATTCCACTTGACC 25941939
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| |||||||| |||||||| ||||||||| | |||||| |||||| ||| || | ||
Sbjct 25941938 AGCAACGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTTAGACTGCA 25941879
Query 22397 ACATTCAAAAAGAATCCA 22414
|||| || ||||| ||||
Sbjct 25941878 ACATCCAGAAAGAGTCCA 25941861
>seq10
Length=138149186
Score = 122 bits (134), Expect = 7e-23
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||| ||||| || || |||
Sbjct 22464927 AGATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCA 22464986
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| | || || ||| ||||||||||||||||||||||| || || ||
Sbjct 22464987 GTGACACCATTGAGAATGTCAGTGCGAAAATTCAAGACAAGGAGGGTATCCCCCCTGACA 22465046
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || ||||| ||||||||| |||||||| | |||||| |||||| |||| || ||||
Sbjct 22465047 AGCAGCGTCTGATATTTGCCAGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACA 22465106
Query 22397 ACATTCAAAAAGAATCCACC 22416
|| | || ||| | |||||
Sbjct 22465107 ACGTCCAGAAACAGCCCACC 22465126
>seq15
Length=107357366
Score = 118 bits (130), Expect = 9e-22
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||| ||||| || | |||
Sbjct 57005111 AGATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCAAGCCCA 57005170
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|||| ||| | | || ||||| |||||||| |||||||||||||| ||||| || |
Sbjct 57005171 CCGACACCATTTAGAATGTCAAAACCAAAATTCAGGACAAGGAGGGTATCCCACCTGACC 57005230
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | ||| |||||| | | |||| | | |||||| || ||| |||| | ||||
Sbjct 57005231 AGCAGCATCTGATATTTTCTAGGAAACGGCTGGAGGATGGCCACACTCTCTCAGGCTACA 57005290
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| || ||||| ||||||
Sbjct 57005291 ACATCCAGAAAGAGTCCACC 57005310
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || | ||| || || | || || ||||| |||| ||||| || | | |
Sbjct 20294569 AGATGCAGATCTCTGTAAAGACCCTCACAGGCAAAACCATCACCCTTGAGGTCCAGCCAA 20294628
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| || || ||||| || || || ||||||||||| || ||||| || |
Sbjct 20294629 GTGACACCAGTGAAAATGTCAAAGCCAAGATCCACGACAAGGAGGGCATCCCACCTGACC 20294688
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | ||| ||||||| ||||||||| |||||| ||| || | || || || |
Sbjct 20294689 AGCAGCATCTGATATTTGTGAACAAACAGTTGGAGGATGGCCGTACTCTTTCAGACTATA 20294748
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| || ||||| ||||||
Sbjct 20294749 ACATCCAGAAAGAGTCCACC 20294768
>seq13
Length=135337776
Score = 109 bits (120), Expect = 5e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||| | || || | || || || || |||| ||||| ||||| ||
Sbjct 116540811 AGATGCAGATCTTTATGAACACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGCCCG 116540752
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| | || || ||||| ||||| |||||||||||||| || | || || |
Sbjct 116540751 GTGACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTGCCTGACC 116540692
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || |||| ||||||| ||||||||| | |||||| || || |||| || || |
Sbjct 116540691 AGCAGTGTCTGATATTTGTGGGCAAACAGCTGGAGGATGGCCACAGTCTCTCAGACTAGA 116540632
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| || ||||| ||||||
Sbjct 116540631 ACATCCAGAAAGAGTCCACC 116540612
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||| || || || || | || || || || |||| ||||| || || |||
Sbjct 126789530 GATGCAAATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 126789471
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || | ||||| ||| || ||||||||||| || || || || || ||
Sbjct 126789470 TGACACCATCGAGAACGTCAAAGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 126789411
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || ||||| || |||||| | || ||| |||||| | || || |||||
Sbjct 126789410 GCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAA 126789351
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||| || ||||| ||||| | || || || |||| ||| | || |||
Sbjct 126789350 CATCCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGGGGT 126789302
>seq9
Length=144709823
Score = 109 bits (120), Expect = 5e-19
Identities = 92/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|||||||| ||||||||||| || ||||| || || || ||||| ||| |||| ||||||
Sbjct 122689370 AAAATTCAGGACAAGGAGGGCATCCCACCTGACCAGCAGCGTCTGATACTTGCGGGCAAA 122689429
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| |||||| |||| || |||||||| || ||||| |||||
Sbjct 122689430 CAGCTGGAGGATGGCCGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCAC 122689482
>seq4
Length=205426864
Score = 109 bits (120), Expect = 5e-19
Identities = 145/200 (73%), Gaps = 1/200 (1%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||| ||| || ||||| || || | || || || || |||||||||| || | | |
Sbjct 27700144 AGACGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACTCTTGACGTCAAGCCAA 27700203
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| | || || | ||| ||||||||||||||||| ||||| ||||| || |
Sbjct 27700204 GTGACACCATTGAGAATGTGAAAGCCAAAATTCAAGACAAGGA-GGTATCCCACCTGACC 27700262
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | ||| ||| |||| ||||||||| | |||||| ||| || |||| || | ||
Sbjct 27700263 AGCAGCATCTGATACTTGCTGGCAAACAGCTGGAGGATGGCCGAACTCTCTCAGACTGCA 27700322
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| | ||||| ||||||
Sbjct 27700323 ACATCCGGAAAGAGTCCACC 27700342
>seq17
Length=90481686
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||| || ||||| || || | || || | || |||| ||||| || || |||
Sbjct 47492015 AGATGTGGATCTTTGTGAAGACCCTCACAGGCCAGACCATCACCCTTGAGGTCGAGCCCA 47491956
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
||| || || || ||||| ||||||||||||| | |||| || ||| || |
Sbjct 47491955 GTGATGCCACTGAGAATGTCAAAGCCAAAATTCAAGACAGGTAGGGCATCTTACCTGACC 47491896
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || |||| ||||||| ||||||||| | ||||| || ||| ||| || ||||
Sbjct 47491895 AGCAGTGTCTGATATTTGAGGGCAAACAGCTGAAGGATGGCCACACACTCTTAGACTACA 47491836
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| || ||||| ||||||
Sbjct 47491835 ACATCCAGAAAGAGTCCACC 47491816
>seq24
Length=155392059
Score = 82.4 bits (90), Expect = 6e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 22220 TGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCG 22279
|||| ||||| || ||||| ||| || || || |||| ||||| || ||| || | |
Sbjct 3657822 TGCAGATTTTCGTGAAAACCCTAAGGGGGAAGACCATCACCCTTGAGGTTGAACCCTCAG 3657881
Query 22280 ATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAAC 22339
|| | | || || | || || || || || |||||||| ||||| || ||||| |
Sbjct 3657882 ATGCGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAGGGAATTCCTCCTGATCAGC 3657941
Query 22340 AACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399
|| | || || ||||| ||||| || | || ||| || || | || || | |||||
Sbjct 3657942 AAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTGCAACA 3658001
Query 22400 TTCAAAAAGA 22409
||||||| ||
Sbjct 3658002 TTCAAAAGGA 3658011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419675444020810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |