Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq24 154 3e-32
>seq24
Length=155392059
Score = 154 bits (170), Expect = 3e-32
Identities = 418/626 (67%), Gaps = 34/626 (5%)
Strand=Plus/Minus
Query 42286 TCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCG 42345
||||| |||| || |||||| ||||| ||||||||| || ||| ||||||| |||
Sbjct 44584342 TCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGGACCACCG 44584283
Query 42346 AGGAGATTGACCTGGCCAAGGACA--CGGCCGGCTGGGAGTCACTGT---CTGAGAACGA 42400
||||| | |||||| ||||||||| |||| |||||| || | | | ||| | ||
Sbjct 44584282 AGGAGGTGGACCTGTCCAAGGACATTCGGCA--CTGGGAATCCCCGAAGCCCGAGGA-GA 44584226
Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460
| |||| || | | |||| ||||| || || ||| |||||||| |||||
Sbjct 44584225 GATATTTTATATCCCATG--TTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGA 44584168
Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTAC 42518
|| ||| | || | || || ||| ||| || || ||||| |||||
Sbjct 44584167 AAATTTGGTGGAGCGATTTAGCCAAATAGTTCAGATTACA--GAAGCCCGCTGTTTCTAT 44584110
Query 42519 GGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---AC 42575
|||||||| || ||||| || ||| | || ||||| |||| | || || | ||
Sbjct 44584109 GGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTAT---AGTCTCCTTATTGAC 44584053
Query 42576 ACGTACATCCTGGATCCCGTCGAGCGTAACGGG----CTGTTCAAGGCCATGGAGACGAT 42631
|| |||||| |||||| || || || || ||||| ||||| || |||||
Sbjct 44584052 ACTTACATCAAAGATCCCAAAGA----AAAGGAATTTCTCTTCAATGCCATTGA-ACGAT 44583998
Query 42632 GCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAAC 42691
||| || |||||||| ||| || ||||| | |||||| | | || || ||
Sbjct 44583997 GCCTTGTGTCAAGAAGGCGGCAGATTGGGCCTTGTGCTGGATTGGGGACAAAGAGGCTAC 44583938
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
| || || | | |||||||| | || || || ||||||||||| || || | ||
Sbjct 44583937 CTATGGTGAACGTGTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTT 44583878
Query 42752 CGCCTCCATCTTCTGGCTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
|| || || |||||||||||| | ||| | |||||| || ||||| || || || |
Sbjct 44583877 TGCATCGATATTCTGGCTCAAGAAACGAGGACT-GATGCCTGGCCTCACGTTTTCCAATG 44583819
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
|||| || ||||| || ||||| | || | || ||||| ||| | ||||| | |
Sbjct 44583818 AACTTATTAGCAGAGATGAGGGTTTACACTGTGATTTTGCTTGCTTGATGTTC---AAAC 44583762
Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAG 42896
|||| ||||| || ||| |||||
Sbjct 44583761 ACCTGGTACACAAACCATCGGAGGAG 44583736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944217923238240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |