Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq24 154 3e-32 >seq24 Length=155392059 Score = 154 bits (170), Expect = 3e-32 Identities = 418/626 (67%), Gaps = 34/626 (5%) Strand=Plus/Minus Query 42286 TCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCG 42345 ||||| |||| || |||||| ||||| ||||||||| || ||| ||||||| ||| Sbjct 44584342 TCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGGACCACCG 44584283 Query 42346 AGGAGATTGACCTGGCCAAGGACA--CGGCCGGCTGGGAGTCACTGT---CTGAGAACGA 42400 ||||| | |||||| ||||||||| |||| |||||| || | | | ||| | || Sbjct 44584282 AGGAGGTGGACCTGTCCAAGGACATTCGGCA--CTGGGAATCCCCGAAGCCCGAGGA-GA 44584226 Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460 | |||| || | | |||| ||||| || || ||| |||||||| ||||| Sbjct 44584225 GATATTTTATATCCCATG--TTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGA 44584168 Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTAC 42518 || ||| | || | || || ||| ||| || || ||||| ||||| Sbjct 44584167 AAATTTGGTGGAGCGATTTAGCCAAATAGTTCAGATTACA--GAAGCCCGCTGTTTCTAT 44584110 Query 42519 GGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---AC 42575 |||||||| || ||||| || ||| | || ||||| |||| | || || | || Sbjct 44584109 GGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTAT---AGTCTCCTTATTGAC 44584053 Query 42576 ACGTACATCCTGGATCCCGTCGAGCGTAACGGG----CTGTTCAAGGCCATGGAGACGAT 42631 || |||||| |||||| || || || || ||||| ||||| || ||||| Sbjct 44584052 ACTTACATCAAAGATCCCAAAGA----AAAGGAATTTCTCTTCAATGCCATTGA-ACGAT 44583998 Query 42632 GCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAAC 42691 ||| || |||||||| ||| || ||||| | |||||| | | || || || Sbjct 44583997 GCCTTGTGTCAAGAAGGCGGCAGATTGGGCCTTGTGCTGGATTGGGGACAAAGAGGCTAC 44583938 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 | || || | | |||||||| | || || || ||||||||||| || || | || Sbjct 44583937 CTATGGTGAACGTGTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTT 44583878 Query 42752 CGCCTCCATCTTCTGGCTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 || || || |||||||||||| | ||| | |||||| || ||||| || || || | Sbjct 44583877 TGCATCGATATTCTGGCTCAAGAAACGAGGACT-GATGCCTGGCCTCACGTTTTCCAATG 44583819 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||| || ||||| || ||||| | || | || ||||| ||| | ||||| | | Sbjct 44583818 AACTTATTAGCAGAGATGAGGGTTTACACTGTGATTTTGCTTGCTTGATGTTC---AAAC 44583762 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAG 42896 |||| ||||| || ||| ||||| Sbjct 44583761 ACCTGGTACACAAACCATCGGAGGAG 44583736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944217923238240