Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 4e-27
seq9876 122 9e-23
seq17 120 3e-22
seq1 109 5e-19
seq3 107 2e-18
seq8 95.1 1e-14
seq24 89.7 5e-13
seq7 87.8 2e-12
seq18 84.2 2e-11
>seq2
Length=114371477
Score = 136 bits (150), Expect = 4e-27
Identities = 150/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || |||||||| || | | ||||| | ||||| |||||||||||
Sbjct 110580032 GTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 110579973
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||||| ||||||||||||||| || ||||| || || || || || |||
Sbjct 110579972 GCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 110579913
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || |||| || ||||| || | || | |||||||||||| | |||
Sbjct 110579912 ACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTT 110579853
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| ||||| || ||||||||
Sbjct 110579852 TTCACGAAGATCTGCATTTT 110579833
>seq9876
Length=376000
Score = 122 bits (134), Expect = 9e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||||| ||||| || |||||||| || | | ||| | |||
Sbjct 278164 AGGACCAGATGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGACTGCAGCCATCT 278105
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||||||||| ||| | |||||| ||||||||| | ||| | |||||||| |||
Sbjct 278104 TCCAGCTGCTTGCCTGCAAAGATGAGCTTCTGCTGGTCATGGGGATTGCCTTCTTTATCT 278045
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| ||||| ||| ||| || | || ||| || |||||||| | || | | ||
Sbjct 278044 TGGATTTTGGCCTTGACATTTTCGATAGTGGCACTGGGCTCCACTTCAAGGGTGATGATC 277985
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||||| | ||||| ||||| || ||||||||
Sbjct 277984 TTGCCGGTAAGGGTTTTCACGAAGATCTGCATTTT 277950
>seq17
Length=90481686
Score = 120 bits (132), Expect = 3e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| | ||| ||||||| || || || |||||||| ||||| || | | || || |
Sbjct 60459960 TCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCC 60460019
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| ||||||||||| ||| | || || | |||||| || |||||||||||||| ||
Sbjct 60460020 ATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 60460079
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||||||| || | ||||| || || || || | || |
Sbjct 60460080 ATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGAT 60460139
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || || | ||||| |||||||| ||||||||
Sbjct 60460140 GGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 60460178
>seq1
Length=229774977
Score = 109 bits (120), Expect = 5e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || |||||||| || | | || | | ||||| |||||| ||||
Sbjct 198269202 GTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACAGCCATCTTCTAGCTGCATGCCT 198269261
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||||| |||||||||||| | || ||||| || || || || || |||
Sbjct 198269262 GCAAAGATGAGCCTCTGCTGGTCGGGGAGGATGCCTTCCTTATCCTGGATATTGGCCTTC 198269321
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || |||| || ||||| || | || | ||||||||| |||| ||
Sbjct 198269322 ACATTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 198269381
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| ||||| || ||||||||
Sbjct 198269382 TTCACGAAGATCTGCATTTT 198269401
>seq3
Length=247869975
Score = 107 bits (118), Expect = 2e-18
Identities = 147/207 (71%), Gaps = 10/207 (5%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||| ||||| || |||||||| || | | ||||| | ||||| |||||||||||
Sbjct 140398431 GTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 140398490
Query 64307 GCATAAATGAGCCGCTGCTGGTCGG----------GAGGAATTCCTTCTTTTTCTTGTAT 64356
||| | ||||||| ||||||||||| | || | |||||||| || || ||
Sbjct 140398491 GCAAAGATGAGCCTCTGCTGGTCGGGGCTGGGGGTGGGGGGTGCCTTCTTTATCCTGGAT 140398550
Query 64357 TTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCC 64416
|| ||| ||| |||| || |||| || |||||||| | || | |||||||||
Sbjct 140398551 CTTGGCCTTCACATTTTCCATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCC 140398610
Query 64417 GGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || || ||||| || |||||
Sbjct 140398611 AGTCAGGGTCTTCACGAAGATCTGCAT 140398637
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64250 GATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCA 64309
|| ||||| ||||||||||| || || |||| | ||||| | ||||||||| ||
Sbjct 153223749 GACTCTTTCTGAATGTTGTAGTCACAAACAGTGCAGCCATCTTCTAACTGCTTGCCTACA 153223808
Query 64310 TAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACA 64369
| ||||| | |||||||| || || || || ||||| | || || || ||| |||
Sbjct 153223809 AAGATGAGACTGTGCTGGTCAGGGGGGATGCCCTCTTTAACATGGATCTTGGCCTTCACA 153223868
Query 64370 ACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTT 64429
| | | |||| | ||||| || | || | |||||||| ||||| |||||
Sbjct 153223869 TTTTGGAGGATGTCACTTGGCTCCACCTCCAGGGTGATGGTCTTGCTGGTCAGGGTTTTC 153223928
Query 64430 ACGAAAATTTGCATTTT 64446
| ||| |||||||||||
Sbjct 153223929 AGGAAGATTTGCATTTT 153223945
>seq8
Length=162613886
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || |||||||||||||| || |
Sbjct 160503472 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAAGCTCCTTTTGAATGTTGTAGTCAG- 160503414
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| || | | ||||| || |||||||| ||| | || || | ||||| || |||||
Sbjct 160503413 -ACAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 160503355
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | |||| || || ||
Sbjct 160503354 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCAAGGGTTCAAC 160503295
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| | || | |||||| || || | ||||||| | |||| ||||||||
Sbjct 160503294 CTTGAGGGTGATGGTCTTCCCCGTAAGGGTTTTTATGGAAATCTGCATTTT 160503244
>seq24
Length=155392059
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287
||| |||| ||||||| || | || |||||||||||| | || | | || || |
Sbjct 3658036 TCTCAGCAAAAGATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCC 3657977
Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347
||||| || |||||||| ||| | || || | ||||| || ||||||||||| || ||
Sbjct 3657976 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCCTCCTT 3657917
Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407
|| || || || ||||||| || | | ||| || || || || | || |
Sbjct 3657916 ATCCTGGATCTTGGCCTTTACATTTTCTATCGCATCTGAGGGTTCAACCTCAAGGGTGAT 3657857
Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| || | | ||||| |||||||| |||| |||
Sbjct 3657856 GGTCTTCCCCCTTAGGGTTTTCACGAAAATCTGCAGTTT 3657818
>seq7
Length=173848474
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| | ||| ||||||| || || || |||||||| |||| || |
Sbjct 115442974 ACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATACTGTAGTCAGA 115442915
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | | ||||| || ||||| || ||| | || || | ||||| || |||||
Sbjct 115442914 CAAAGTACATCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 115442855
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | ||||| || || |
Sbjct 115442854 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAAGGGTTCAGC 115442795
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | |||||| | | | ||||| |||||||| ||||||||
Sbjct 115442794 CTCGAGGGTGATGGTCTTCTCCATAAGGGTTTTCACGAAAATCTGCATTTT 115442744
>seq18
Length=83442489
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| ||| | ||| | ||||| || || ||||||||||| ||||| | |
Sbjct 46140274 ACCACCACGCAGTCTCAACACAAAATGAAGGGTAGACTCTTTTTGAATATTGTAGCCAGA 46140333
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | ||||| || |||||||| ||| | || | | ||||| || |||||
Sbjct 46140334 CAAAGTATATCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGG 46140393
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || || || || || ||||||| || | ||||| | || ||
Sbjct 46140394 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAATGGTTCAAC 46140453
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| | || ||||| || || | ||||| |||||||| ||||||||
Sbjct 46140454 CTTGAGGGTGGTTGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 46140504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499580633116560
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