Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq13 98.7 1e-15 seq12 82.4 8e-11 >seq13 Length=135337776 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || ||||||||||| || ||||| || || || ||||| |||| | Sbjct 126789564 GACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGACCATCTTCCAGCTGTTTTCCGGCA 126789623 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | ||| ||||| ||||| || ||||| || || ||| ||| || | Sbjct 126789624 AAGATCAACCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCTTGGATCTTTGCCTTGACA 126789683 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| ||||||| || | || |||||||||||||| || Sbjct 126789684 TTCTCGATGGTGTCACTGGGCTCAACCTCGAGGGTGATGGTCTTACCAGTCAGAGTCTTC 126789743 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 126789744 ACAAAGATCTGCAT 126789757 >seq12 Length=134183262 Score = 82.4 bits (90), Expect = 8e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699 |||||| ||| || || | ||| |||||||||||||| ||| |||| || ||||| | Sbjct 4096309 TGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGT 4096250 Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 |||| || ||||| || | |||||| ||||||| ||||| Sbjct 4096249 TGCTCTTTCGATTACAGGAATCTTTGTAGAGCATATACGG 4096210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496198667501280