Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 2e-12 >seq5 Length=195804263 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 || ||||||||||| ||||| || |||| || |||||| |||||||| | | ||| Sbjct 73896738 ATCATGATTACATACCCATCCACCAATGGGGTGTTTGAAGAGAACATCAGTGACGTGTGT 73896679 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | | | ||| | |||| || |||| || || || | |||||| | || || ||| Sbjct 73896678 GACCTCATCCATCAACATGGAGGATAGGTCTACCTAGACAGGGCAAATATGAACGCTCAG 73896619 Query 159667 GTAGG--TCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATA 159724 || || ||| | || | |||| ||| | ||||| | || ||||| | || | Sbjct 73896618 GTGGGAATCTGTC--GCCCTGGAGACTTTGGGTCTGATGTCTCGCACCTAAATCTTCACA 73896561 Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780 |||| ||||| ||||| || |||| || ||||||||| | || || | ||| ||| Sbjct 73896560 AGACCTTCTGCATTCCCCACAGAGGAGGTGGTCCTGGCATGGGGCCCAGTGGAGTA 73896505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587975679524640