Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq1 125 1e-23 >seq1 Length=229774977 Score = 125 bits (138), Expect = 1e-23 Identities = 195/277 (70%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 197371 GGATCCGTGGGAGGTTTCGCCAGTTTTCCGCTAAATATCTCAAACGCGACAGATATTGAG 197430 |||||| ||| |||| || | | | || ||||| |||||| | ||||| |||||| Sbjct 140079372 GGATCCTAGGG-GGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGAG 140079430 Query 197431 AACGTGGCTTGGAACGGCCCTAAAATCGCTTTAGCATTTGCCAATCCTAAAG---ACGTT 197487 ||||| |||| || || |||| ||| | || || || ||| |||| | || Sbjct 140079431 AACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTA 140079490 Query 197488 ACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAACCAACTACTCTTTG 197547 ||||| |||| |||||||||| ||| || | |||| | | | | ||||| || Sbjct 140079491 ACCATTATGGTCAAAAGCTACCTGGGCCGACTAGACATCACCAAGTGGAGTTACTCCCTG 140079550 Query 197548 TGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCAAATTAACAAAAAT 197607 ||||| || || ||||| |||||||||| || || || || ||||| || ||| ||| Sbjct 140079551 TGCATCAGCAATCTGACTCTGAATGATGCAGGATCCTACAAAGCCCAGATAAACCAAAGG 140079610 Query 197608 AATTCCCAAGTCACCACCAAGGAGGAATTTACTCTGT 197644 |||| |||||||||| |||||||||| || |||| Sbjct 140079611 AATTTTGAAGTCACCACTGAGGAGGAATTCACCCTGT 140079647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702098621403360