Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_016447.1
Length=219474
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 1e-23
>seq1
Length=229774977
Score = 125 bits (138), Expect = 1e-23
Identities = 195/277 (70%), Gaps = 4/277 (1%)
Strand=Plus/Plus
Query 197371 GGATCCGTGGGAGGTTTCGCCAGTTTTCCGCTAAATATCTCAAACGCGACAGATATTGAG 197430
|||||| ||| |||| || | | | || ||||| |||||| | ||||| ||||||
Sbjct 140079372 GGATCCTAGGG-GGTTCCGTGACTCTCCCCCTAAACATCTCAGTAGACACAGAGATTGAG 140079430
Query 197431 AACGTGGCTTGGAACGGCCCTAAAATCGCTTTAGCATTTGCCAATCCTAAAG---ACGTT 197487
||||| |||| || || |||| ||| | || || || ||| |||| | ||
Sbjct 140079431 AACGTCATCTGGATTGGTCCCAAAAATGCTCTTGCTTTCGCACGTCCCAAAGAAAATGTA 140079490
Query 197488 ACCATAATGGATAAAAGCTACCAGGGTCGTGTCAACATTAGCCAAACCAACTACTCTTTG 197547
||||| |||| |||||||||| ||| || | |||| | | | | ||||| ||
Sbjct 140079491 ACCATTATGGTCAAAAGCTACCTGGGCCGACTAGACATCACCAAGTGGAGTTACTCCCTG 140079550
Query 197548 TGCATTAGGAACCTGACCGTGAATGATGCTGGTTCGTATAAGGCCCAAATTAACAAAAAT 197607
||||| || || ||||| |||||||||| || || || || ||||| || ||| |||
Sbjct 140079551 TGCATCAGCAATCTGACTCTGAATGATGCAGGATCCTACAAAGCCCAGATAAACCAAAGG 140079610
Query 197608 AATTCCCAAGTCACCACCAAGGAGGAATTTACTCTGT 197644
|||| |||||||||| |||||||||| || ||||
Sbjct 140079611 AATTTTGAAGTCACCACTGAGGAGGAATTCACCCTGT 140079647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 702098621403360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |