Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 4e-15 >seq5 Length=195804263 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||| ||| | || || | ||||||||| || |||| || ||||| ||||| ||||| || Sbjct 73896505 TACTCCACTGGGCCCCATGCCAGGACCACCTCCTCTGTGGGGAATGCAGAAGGTCTTGTG 73896564 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA--CCTACCTGT 138299 | |||||| || | ||||| | ||| |||| | || | ||| || ||||| Sbjct 73896565 AAGATTTAGGTGCGAGACATCAGACCCAAAGTCTCCAGGGC--GACAGATTCCCACCTGA 73896622 Query 138300 GCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACAT 138359 || || | |||||| | || || || |||| || |||| | ||| | || | ||| Sbjct 73896623 GCGTTCATATTTGCCCTGTCTAGGTAGACCTATCCTCCATGTTGATGGATGAGGTCACAC 73896682 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | | |||||||| |||||| || |||| || ||||| ||||||||||| || Sbjct 73896683 ACGTCACTGATGTTCTCTTCAAACACCCCATTGGTGGATGGGTATGTAATCATGAT 73896738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578924042130480