Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_024771.1
Length=151601
Score E
Sequences producing significant alignments: (Bits) Value
seq2750 91.5 1e-13
>seq2750
Length=44035
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/228 (70%), Gaps = 5/228 (2%)
Strand=Plus/Minus
Query 107304 GCGTGTGACCCCGGCTGTCCGCGCCGCACCGTGAGCGTCGTGTTGATGAGGAGCACCCCC 107363
|||||||| || |||| || |||| || || | ||||||| || | ||| |||
Sbjct 2142 GCGTGTGAGCCGGGCTTGCCCTTTTGCACAGTCAGGATGGTGTTGAGTAGCAACACTCCC 2083
Query 107364 TGGAGGGCCCACTTTTCCAGGTAGCCGTGGGCGGGGAG-GCGAAATGCCGGGTAGGTCTT 107422
||| ||||||| ||||| ||||||| | ||| | | ||| | |||| |||
Sbjct 2082 TGGGAGGCCCACGCGTCCAGACAGCCGTGATCCGGGGGAGAGAACT-CCGGCAGACTCTG 2024
Query 107423 TTGCACCGCCGCGTAGATGTTGCGCAGGCTTGGGGGAACTGGCACCCCCTTTCGCACGCT 107482
|| | | | ||||||||| | |||||| ||||||| ||| | || | | ||||||
Sbjct 2023 ATGAAGTTCTGTGTAGATGTTCCTCAGGCTGGGGGGAATTGGGAAGCCGTATGCCACGCT 1964
Query 107483 GAAAGCCAGCCCGTGCGCCTGGCCGGGGCCGTGGTAGGGGTCCTGGCC 107530
||| ||||| |||| || || || ||||| ||||||||||||||
Sbjct 1963 GAATGCCAGGCCGTTTGCTTGACCT---CCGTGATAGGGGTCCTGGCC 1919
Score = 82.4 bits (90), Expect = 7e-11
Identities = 189/286 (66%), Gaps = 24/286 (8%)
Strand=Plus/Minus
Query 83297 GGCAATGGAGACGGCCGCGTCCTGGCTGCTGTTGCCCTCGACGGCCACCCGCACCGCGTC 83356
||| |||| || || | ||||||||| ||||||||||| || || | | | || | ||
Sbjct 21141 GGCGATGGCTACCGCAGAGTCCTGGCTACTGTTGCCCTCCACTGCTATCTTCGCCTCCTC 21082
Query 83357 AAAG----GGTCGCGGGTG--GATGGCGAAGATCTGCGCCAAGCACTGGGCTGCACACCG 83410
|||| ||| | ||| ||| | | |||| | |||| | || |||
Sbjct 21081 AAAGTGGGGGTGCAGCGTGACGATCGAGGAGATGAGGGCCACG---------GCGCACGT 21031
Query 83411 GGCGATGAGCTCGGCGGAGCTGCCCGTGAGGGCGCTCAGGAAAAAGTGCTCCAGGCCAAA 83470
|||||| | ||||| | ||||| ||| | ||||||| ||||| |||||||| |
Sbjct 21030 GGCGATCTGGAGGGCGGCGTCCCCCGTCAGGTCCTTCAGGAAGAAGTGTTCCAGGCCTAG 20971
Query 83471 AACAAT---------CCAGTCAGACCGGTAGCGGCCCACGACCGCCACGCCCGTCCCGGA 83521
|| || | || |||| || | || |||| | || | ||| || |||||
Sbjct 20970 GACGATGACCCTGGTCGGGTTCGACCTGTCGTGGGTCACGGCGGCGATGCCGGTGCCGGA 20911
Query 83522 CGCCAGGGAGTTGGTGGTAAAGGCCGGGTCTACGTACACGTAGAGG 83567
|| || |||| ||||| ||||||| || |||||||||||||||
Sbjct 20910 GGCGGAGGTGTTGTTGGTATAGGCCGGATCCACGTACACGTAGAGG 20865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 484932914491440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |