Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_025963.1
Length=139981
Score E
Sequences producing significant alignments: (Bits) Value
seq873 120 3e-22
>seq873
Length=4833
Score = 120 bits (132), Expect = 3e-22
Identities = 224/326 (69%), Gaps = 11/326 (3%)
Strand=Plus/Minus
Query 133076 TCTCTCCTAGATGATTTTAAAGGATATTTGGGGTGCCAAGCACTCTCGGAGATGATCCAG 133135
||||| || || ||||||||||| || | || || || || ||||| |||||||| ||
Sbjct 2660 TCTCTGCTGGAGGATTTTAAAGGCTACCTTGGATGTCAGGCCCTCTCAGAGATGATTCAA 2601
Query 133136 TTCTACCTGGAAGAAGTCATGCCGCAGGCAGAGAATCACGGACCAAC-----GGATAG-- 133188
|| || ||||| ||||| ||||| ||||| || || || ||||| || | | ||
Sbjct 2600 TTTTATCTGGAGGAAGTTATGCCACAGGCTGAAAACCA-GGACCCACTAGCCGCAGAGCA 2542
Query 133189 TGTCAAACAACTTGGTGAAAAGCTGCATACACTAAACCAGAAATTCGGCGAGTGTCCTAG 133248
||| || || |||||||| || | || |||| | | || ||| | ||
Sbjct 2541 TGTGAACTCTCTGGGTGAAAATCTAAAGACCCTAAGGCTCCGCCTGCGCAGGTGCCACAG 2482
Query 133249 GTGGTTTCCTTGTTACTATAACACCACTCCAGCTGTAGAGAATGTGAAAAGCGTATTCAG 133308
|| | || ||| | | || | || |||||||||| | || |||| | ||||
Sbjct 2481 GTTTCTACCGTGTGAGAACAAGAGCAA---AGCTGTAGAGCAGGTTAAAAATGCCTTCAA 2425
Query 133309 CAAGCTCCAGGAACGCGGTGTGTACAAGGCCATGAGCGAGTTCGACATCTTCATCAACTA 133368
|||||| |||||| || | ||||| |||||||| || || ||||| || || |||||
Sbjct 2424 CAAGCTGCAGGAAAAAGGAATCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTA 2365
Query 133369 CATAGAGACATATACCACCATGAAAT 133394
|||||| |||| | ||||||| ||
Sbjct 2364 CATAGAAGCATACATGACCATGAGAT 2339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447753689846640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |