Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq873 120 3e-22 >seq873 Length=4833 Score = 120 bits (132), Expect = 3e-22 Identities = 224/326 (69%), Gaps = 11/326 (3%) Strand=Plus/Minus Query 133076 TCTCTCCTAGATGATTTTAAAGGATATTTGGGGTGCCAAGCACTCTCGGAGATGATCCAG 133135 ||||| || || ||||||||||| || | || || || || ||||| |||||||| || Sbjct 2660 TCTCTGCTGGAGGATTTTAAAGGCTACCTTGGATGTCAGGCCCTCTCAGAGATGATTCAA 2601 Query 133136 TTCTACCTGGAAGAAGTCATGCCGCAGGCAGAGAATCACGGACCAAC-----GGATAG-- 133188 || || ||||| ||||| ||||| ||||| || || || ||||| || | | || Sbjct 2600 TTTTATCTGGAGGAAGTTATGCCACAGGCTGAAAACCA-GGACCCACTAGCCGCAGAGCA 2542 Query 133189 TGTCAAACAACTTGGTGAAAAGCTGCATACACTAAACCAGAAATTCGGCGAGTGTCCTAG 133248 ||| || || |||||||| || | || |||| | | || ||| | || Sbjct 2541 TGTGAACTCTCTGGGTGAAAATCTAAAGACCCTAAGGCTCCGCCTGCGCAGGTGCCACAG 2482 Query 133249 GTGGTTTCCTTGTTACTATAACACCACTCCAGCTGTAGAGAATGTGAAAAGCGTATTCAG 133308 || | || ||| | | || | || |||||||||| | || |||| | |||| Sbjct 2481 GTTTCTACCGTGTGAGAACAAGAGCAA---AGCTGTAGAGCAGGTTAAAAATGCCTTCAA 2425 Query 133309 CAAGCTCCAGGAACGCGGTGTGTACAAGGCCATGAGCGAGTTCGACATCTTCATCAACTA 133368 |||||| |||||| || | ||||| |||||||| || || ||||| || || ||||| Sbjct 2424 CAAGCTGCAGGAAAAAGGAATCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTA 2365 Query 133369 CATAGAGACATATACCACCATGAAAT 133394 |||||| |||| | ||||||| || Sbjct 2364 CATAGAAGCATACATGACCATGAGAT 2339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447753689846640