Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq24 269 2e-67
seq1 140 3e-28
seq2 113 4e-20
seq7 104 2e-17
seq19 89.7 4e-13
seq9 89.7 4e-13
seq9803 84.2 2e-11
>seq24
Length=155392059
Score = 269 bits (298), Expect = 2e-67
Identities = 604/895 (67%), Gaps = 28/895 (3%)
Strand=Plus/Minus
Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759
|||||| | || || | | || ||||| || ||||| ||||| || || || ||||
Sbjct 44584358 TTTGTCATCTTCCCCGTCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAGGCT 44584299
Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTA--GCACATTGGATTGCAT 43817
|| || ||||| | || || || || || | || ||| | |||| | ||| | |
Sbjct 44584298 TCCTTCTGGACCACCGAGGAGGTGGACCTGTCCAAGGACATTCGGCAC-TGGGAATCCCC 44584240
Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877
|| || | || | | |||||||||| ||| ||| || ||||| || || || |
Sbjct 44584239 GAAGCCCG-AGGAGAGATATTTTATATCCCATGTTCTGGTTTTCTTTGCAGCAAGTGATG 44584181
Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCA 43936
| ||||| |||||||||||||| || ||| ||| |||||| ||||| ||||||
Sbjct 44584180 GCATAGTAAATGAAAATTTGGTGGAGCGATTTAGCCAAATAGTTCAGATTAC-AGAAGCC 44584122
Query 43937 CGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTT 43996
|| ||||| ||||| || ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct 44584121 CGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTC 44584062
Query 43997 CTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAA 44056
|| || || || |||||||||||| | || ||| | | || ||||| || | |
Sbjct 44584061 CTTATTGACACTTACATCAAAGATCCCAAAGAAAAGGAATTTCTCTTCAATGCCATTG-A 44584003
Query 44057 ACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAAT 44113
|| | ||| | || | ||||| |||||| | ||||| | | |
Sbjct 44584002 ACGATGCCTTGTGTCAAGAAGGCGGCAGATTGGGCCTTGTGCTGGATTGGGGACAAAGAG 44583943
Query 44114 GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGA 44173
| | | | ||| ||||| |||| || || || | || |||||||| |||||||| ||
Sbjct 44583942 GCTACCTATGGTGAACGTGTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGT 44583883
Query 44174 TCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA 44233
|| ||||| | ||||| ||| | ||||||||||| |||||||||| | ||||||||
Sbjct 44583882 TCTTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACGTTTTCC 44583823
Query 44234 AATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA 44293
||||| | || || | ||||| || ||||| || ||||||||||||||| | | |
Sbjct 44583822 AATGAACTTATTAGCAGAGATGAGGGTTTACACTGTGATTTTGCTTGCTTGATGTTCAAA 44583763
Query 44294 TATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTA 44353
| || | | || || || || ||| | | | ||| || || | | || ||
Sbjct 44583762 CACCTGGTACAC---AAACCATCGGAGGAGAAAGTGAGAGAAATAATTATCAATGCTGTT 44583706
Query 44354 AAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGA 44412
|||||||||||||||| | || || || ||||| || | || || ||||| ||
Sbjct 44583705 CAGATAGAACAAGAATTCCTCACCGAGGCCTTGCCTGTGAAGCTCATTGGGATGAATTGC 44583646
Query 44413 ACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTG 44472
|| | | ||||| ||||| ||||| | | ||||| | | | ||||||||||||
Sbjct 44583645 AC-TCTAATGAAGCAATACATTGAGTTTGTGGCAGACAGACTTATGCTGGAACTGGGTT- 44583588
Query 44473 CGATAAACACTATATT----GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGG 44528
| | || | || ||| | | ||| ||||| |||| ||| |||||||| ||
Sbjct 44583587 ---TTAGCAAGGTTTTCGGAGTAGAGAGCCCATTTGACTTTACGGAGAATATTTCACTGA 44583531
Query 44529 AAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGT 44583
||| || ||||| ||||| | | || || || |||||| | ||||| ||
Sbjct 44583530 AAG-----ACTAACTTCTTTGAGAGGAGAGTAGGCGAGTATCAGAGGATGGGAGT 44583481
>seq1
Length=229774977
Score = 140 bits (154), Expect = 3e-28
Identities = 144/186 (77%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 43836 ATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATT 43895
|||||||||| ||| |||| || ||||| || || || || ||||| |||||||| |
Sbjct 140699881 ATTTTATATCCCGTGTTCTGGCTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACT 140699822
Query 43896 TGGTTAGTCGGTTTGCGCAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTT 43954
|||| || ||| ||||||||||| ||||| |||||| || ||||| |||| ||
Sbjct 140699821 TGGTGGAGCGATTTAGCCAAGAAGTTCAGATTAC-AGAAGCCCGCTGTTTCTATGACTTC 140699763
Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATC 44014
||||||||||| ||||| | ||||| |||||||| ||||| || || || || |||||
Sbjct 140699762 CAAATTGCCATGGAAAACACACATTCTGAAATGTATAGTCTCCTTATTGACACTTACATA 140699703
Query 44015 AAAGAT 44020
||||||
Sbjct 140699702 AAAGAT 140699697
>seq2
Length=114371477
Score = 113 bits (124), Expect = 4e-20
Identities = 92/109 (84%), Gaps = 2/109 (2%)
Strand=Plus/Plus
Query 43913 CAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971
||||||||||| |||| ||||||| || ||||| ||||| || ||||||||||| |||||
Sbjct 10277973 CAAGAAGTTCAGATTA-CAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAA 10278031
Query 43972 TATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|| ||||| |||||||| |||||||| || || || ||||| ||||||
Sbjct 10278032 CATACATTCTGAAATGTATAGTCTTCTTATTGACACTTACATAAAAGAT 10278080
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182
|| ||||| |||| || ||||| | |||||||||||||||||||| || || ||||||
Sbjct 10280319 GGTGAACGTGTTGTAGCCTTTGCTGCAGTGGAAGGCATTTTCTTTTCCGGTTCTTTTGCG 10280378
Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242
| ||||| ||| | ||||||||||| |||||||||| | || ||||| ||||| |
Sbjct 10280379 TCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCTAATGAACTT 10280438
Query 44243 ATAAGTCGTGATGA 44256
|| || | |||||
Sbjct 10280439 ATTAGCAGAGATGA 10280452
>seq7
Length=173848474
Score = 104 bits (114), Expect = 2e-17
Identities = 253/380 (67%), Gaps = 9/380 (2%)
Strand=Plus/Minus
Query 47216 GTGTTGCAATTTTTAGGACTTTATGAAAAATCAGGGAAAATATTATTTCTCGGGTTAGAC 47275
||| | || || ||||||| || | |||| || ||| | ||||| | || || |||
Sbjct 29563594 GTGCTCCAGTTCCTAGGACTCTACAAGAAATTTGGAAAACTTGTATTTTTGGGTTTGGAC 29563535
Query 47276 AATGCAGGAAAAACGGCATTACTCCACATGCTCAAA---TACA-ATTGCATGAAAGAGCA 47331
|| ||||| ||||| | | || |||||||||||| ||| |||| | || ||
Sbjct 29563534 AACGCAGGCAAAACCACTCTTCTTCACATGCTCAAAGATGACAGATTGGGTCAA----CA 29563479
Query 47332 TAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGCTGGCATAACATTTAGCAC 47391
| || ||| |||||||||| || ||| | |||| ||||||||| || || |||| ||
Sbjct 29563478 TGTTCCAACACTACATCCGACATCAGAAAAGCTAATAATTGCTGGAATGACTTTTACAAC 29563419
Query 47392 ATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAAATTATTTTCATGTCGT 47451
||||| | || ||||||| ||||| || | || |||||||| | || | |
Sbjct 29563418 TCTTGATCTTGGTGGACACAAGCAAGCATGTCAGGTTTGAAAAAATTATCTCCAAGCAAT 29563359
Query 47452 TGATGCTATAGTTTATATTGTAGACTGTGCAGATTTGACTAGACTGACAGAGGCAAAAAT 47511
| ||| || |||| | | || || | ||||||| || | || | || | ||| |
Sbjct 29563358 TAATGAGATTGTTTTTCTGGTGGATTCTGCAGATCATTCTGGCCTCATGGAATCTAAAGT 29563299
Query 47512 CGAATTCGATGCGTTGTTAAACGATGAACTGTTACACGATGTTCCTATTTTAGTGTTGGG 47571
|| | |||| || | | |||||| | || | |||| || || | | |||||
Sbjct 29563298 TGAGCTTAATGCTTTAATGACTGATGAAATAATATCCAATGTGCCAATCCTTATATTGGG 29563239
Query 47572 CAATAAAATCGACA-AACAA 47590
|| ||||| |||| |||||
Sbjct 29563238 TAACAAAATAGACAGAACAA 29563219
>seq19
Length=77229886
Score = 89.7 bits (98), Expect = 4e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106
||||||| |||| || || ||| | || ||||| || || || |||| ||||
Sbjct 17297977 TGATGGCGCTGCCTCCATGCCATGCCCTCTGCCAGTTCTATGTGGTGAACAGTGAGCTGT 17297918
Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166
| || || |||| || ||||| || |||||||| || || || || || ||||| || |
Sbjct 17297917 CCTGCCAGCTGTACCAGAGATCGGGAGACATGGGCCTCGGTGTGCCTTTCAACATCGCCA 17297858
Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198
| || || ||||||||||| |||||||| |||
Sbjct 17297857 GCTACGCCCTGCTCACGTACATGATTGCGCAC 17297826
>seq9
Length=144709823
Score = 89.7 bits (98), Expect = 4e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552
|||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| |
Sbjct 101019838 AAAATCCTTTTGATTTTATGGAAAACATTTCTTTAGAAGGAAAAACAAATTTCTTTGAGA 101019779
Query 44553 AACGCGTTGGAGAATATCAGCG 44574
|||| ||| ||| ||||||||
Sbjct 101019778 AACGAGTTTCAGAGTATCAGCG 101019757
Score = 82.4 bits (90), Expect = 6e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 43698 GGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGG 43757
|||||||| | |||||||| || || | ||| || ||| ||||||| ||| | |||||||
Sbjct 101043747 GGTTTGTCATCTTTCCAATCCAGTACCCTGATATTTGGAAAATGTATAAACAGGCACAGG 101043688
Query 43758 CGTCATTTTGGACAGCAGAAGAAGT 43782
| || || |||||||||||||| ||
Sbjct 101043687 CTTCCTTCTGGACAGCAGAAGAGGT 101043663
>seq9803
Length=118565
Score = 84.2 bits (92), Expect = 2e-11
Identities = 111/154 (72%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 77394 TCCAGCCGTTCTGCTTCCAGTTCTTAACCCACTTAGTCACACCATTGATGGTGAACATGC 77453
|||| || || | |||||| | |||||| ||||| | |||||| || || ||||| |
Sbjct 107965 TCCACCCATTTTTCTTCCAACCTTGAACCCAGTTAGTTATACCATTTATCGTAAACATAC 107906
Query 77454 TGTCTGTGTAGACGACCAGCTTCTTGATTTTGTTCTCCTGAGCTTGTTGCAGTGCTTTGG 77513
||||||| || | ||||| || ||||| || | ||| ||||||| | || |||
Sbjct 107905 TGTCTGTATACAGAACCAGTTTATTGATGTTCTGAGTCTGTGCTTGTTCAATGGCCTTGC 107846
Query 77514 ATGCAGCCTGGATTTCAGCGCGCTGGTTTGTCTG 77547
| || || || ||||| || | |||||||||||
Sbjct 107845 AGGCTGCATGAATTTCCGCTCTTTGGTTTGTCTG 107812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397406232795370
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