Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq2750 187 2e-42
seq19 116 3e-21
>seq2750
Length=44035
Score = 187 bits (206), Expect = 2e-42
Identities = 345/506 (68%), Gaps = 0/506 (0%)
Strand=Plus/Minus
Query 42673 GAGAACAGACCTTATCCGTACCTGGTAACCGAGGCCAACTTGCTAAGGCAAGTTAGGGAA 42732
||||||||||| | || |||||| || |||||| | || | | | || |
Sbjct 28507 GAGAACAGACCCTTCCCCTACCTGACGGTGGATGCCAACCTACTCTCGAACCTGCGGCAG 28448
Query 42733 TCTGCAGCAGAGGGTCTCTTTAAGAGTTTTGAGCTCCTAGTTGGAAAGGACGTTAGAGAA 42792
|| || || ||||| || ||| | || ||||| || || || || ||||| | ||||||
Sbjct 28447 TCAGCGGCCGAGGGGCTGTTTCACAGCTTTGACCTGCTGGTGGGCAAGGATGCTAGAGAG 28388
Query 42793 AATGGAATTAAATTTGAGGTGCTATTAGGTGTTTACACTAATGTTGTCCAATTCGTCAAG 42852
|| || || ||||| ||||| | || || ||||| || | | |||||| |||
Sbjct 28387 TCGGGCATCAAGTTTGAAGTGCTGCTTGGGGTCTACACGAACGCTATCCAATACGTGCGC 28328
Query 42853 TTTCTAGAAACCTCGTTGGCTATCGGATGTATAAATACCGAGTTTAAAGACTTGAAACGG 42912
||||| || || | ||||| | ||| | || || || || |||||| ||| ||
Sbjct 28327 TTTCTGGAGACGGCACTGGCTGTGTCCTGTGTGAACACGGAATTCAAAGACCTGAGTCGT 28268
Query 42913 ATGACTAATGGTAAAATTCAATTTAAGATTTCGGTTCCCACAATAGCACACGGGGATGGT 42972
||||| |||| || |||||||||| || || || |||||||| || |||||||||||
Sbjct 28267 ATGACGGATGGCAAGATTCAATTTAGAATCTCCGTCCCCACAATTGCTCACGGGGATGGA 28208
Query 42973 AGAAGACCTACTAAACAAAGGCAGTATATTGTAATGAAAGCATGTAACAAACACCACATA 43032
|| ||||| | ||| || || | ||||| | || || |||||||||||||
Sbjct 28207 AGGAGACCCAGTAAGCAGCGGACCTTCATTGTGGTCAAGAATTGCCACAAACACCACATC 28148
Query 43033 AGTACAGAAATTGAACTGGCTGTTCTTGACCTTGAGATTTTAAACAGTTCCCAGGAGACA 43092
||||| ||||| || ||| | | || ||||| ||||| | |||| || |||||
Sbjct 28147 AGTACGGAAATCGAGCTGTCCATGCTGGACCTGGAGATCCTGCACAGCATCCCCGAGACC 28088
Query 43093 CCACTAGATGTCACAGAATATGTTGGTGCTGTAAAAACAATAACATCAGCTCTACAGTTT 43152
|| | || | || || || || ||||| || || | | || || |||||||||
Sbjct 28087 CCTGTCGAATATGCGGAGTACGTGGGGGCTGTCAAGACCGTGGCCTCGGCCCTACAGTTT 28028
Query 43153 GGGGTAGACGCTCTGGAAAGGGGGCT 43178
||||| || || || || ||||| ||
Sbjct 28027 GGGGTCGATGCCCTAGAGAGGGGCCT 28002
Score = 98.7 bits (108), Expect = 8e-16
Identities = 206/307 (67%), Gaps = 0/307 (0%)
Strand=Plus/Minus
Query 55290 ATAGTGATGTATGATGGAATATGTAATCTGAAACATGGGCATGATACTATAGAGTCTTGT 55349
|| |||||||| || || ||||| | | || || ||||| || || || ||| ||
Sbjct 20675 ATGGTGATGTAAGACGGGATATGCAGGCGAAAGCAGGGGCACGAGACCATGCTGTCCTGC 20616
Query 55350 AAATTGAAGTCTTCTTTATGTTGGGTGCAAACATAATTTACCACATTCAACATTTTTTCA 55409
| | || |||| |||| | || |||||| ||||||| |||| || ||
Sbjct 20615 ATGTCAAAATCTTGCCTATGCTCCTGACACACATAACTTACCACGTTCAGCAGCCGCTCC 20556
Query 55410 GATGCATTTTTTAAATTATATAAAAAACTGGTTGTTTGGTCCGATGAGTTCACTGAAGAT 55469
|| | || | ||||| | ||| ||||| | ||||| | ||||| || || ||
Sbjct 20555 TGAGCGTCCTTCAGCTTATAAAGAAAGCTGGTGGCCTGGTCGGCCGAGTTTACGGACGAG 20496
Query 55470 ATAAAAATTAATTTGGCATCCTTTTGAAGCATAAATCCTAAAATCGATGGCAATGAGTCT 55529
|| || || | ||||| ||||| ||||||||||| || | |||| |||| | ||
Sbjct 20495 ATGAAGATGATCTTGGCGTCCTTCTGAAGCATAAAGCCCAGGATCGCCGGCAGGGCCTCC 20436
Query 55530 TTCTTGATGAAATTTGCCTCATCTATGTACAATAAATTGAAGGTTTGACCTCTGATGCTC 55589
|||||||| || || |||||||| | |||| | | || || || || | ||||||
Sbjct 20435 TTCTTGATAAAGTTGGCCTCATCCACAAACAAGAGGTGAAATGTCTGCCCCCGAATGCTC 20376
Query 55590 TGAAAAA 55596
|||||||
Sbjct 20375 TGAAAAA 20369
>seq19
Length=77229886
Score = 116 bits (128), Expect = 3e-21
Identities = 121/159 (76%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837
|| |||||||| ||||||||||| ||||| || ||| || || ||||| || ||||||
Sbjct 17297818 CCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACA 17297877
Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897
|| |||||||| ||||||||||| || || ||||| || || || | | | | ||||
Sbjct 17297878 CCGAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACA 17297937
Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936
|| || || || || |||| || ||||||| ||||||
Sbjct 17297938 TAGAACTGGCAGAGGGCATGGCATGGAGGCAGCGCCATC 17297976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391896522776662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |