Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq13 91.5 1e-13
seq9 89.7 4e-13
>seq13
Length=135337776
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/238 (68%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 39049 TTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTA 39108
||| | | ||| |||| | ||| | ||||| || || ||| |||||| || || ||
Sbjct 116540574 TTAATAATGCCACCTCACAGGCGCAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTC 116540633
Query 39109 TAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGG 39168
|| || | || | | | || || |||||||||||| ||||||| |||| |||||||
Sbjct 116540634 TAGTCTGAGAGACTGTGGCCATCCTCCAGCTGTTTGCCCACAAATATCAGACACTGCTGG 116540693
Query 39169 TCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTC 39228
|| | | | || ||| ||||| |||||| ||||| || | | || || |
Sbjct 116540694 TCAGGCAGGATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACCG 116540753
Query 39229 GACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286
| |||||| || | ||||| | || ||||| || || || | |||||| |||||||
Sbjct 116540754 GGCTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTGTTCATAAAGATCTGCATCT 116540811
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117
|| || || ||||| | ||||| || || ||| |||||| || || || || || |
Sbjct 126789303 CCCCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 126789362
Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177
|| || ||| | || || |||||||| || ||||| || | | ||||||||| | ||
Sbjct 126789363 AGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGG 126789422
Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237
| || || ||||| ||| || ||||| || | | || || || | ||| ||
Sbjct 126789423 ATGCCTTCCTTGTCTTGGATCTTTGCTTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 126789482
Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285
|| | ||||| | || || || || || || || ||||||||||||
Sbjct 126789483 TCAAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACGAAGATTTGCATC 126789530
>seq9
Length=144709823
Score = 89.7 bits (98), Expect = 4e-13
Identities = 109/145 (75%), Gaps = 3/145 (2%)
Strand=Plus/Minus
Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116
||| |||| | ||| | ||||| || || ||| |||||| || || || || || |
Sbjct 122689513 GCCACCTCGCAGGCGCAGCACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCTGA 122689454
Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGG 39175
|| || || | || || |||||||||||||||| ||| |||||||||||||| |||||
Sbjct 122689453 GAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAGTATCAGACGCTGCTGGTCAGGTGG 122689394
Query 39176 GCACGCTCTCTTTGTCCATGATTTT 39200
| | || ||| |||||| ||| |||
Sbjct 122689393 G-ATGCCCTCCTTGTCC-TGAATTT 122689371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429491814716162
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |