Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18]
10,274 sequences; 3,286,643,896 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq17 118 7e-22
seq10 98.7 7e-16
seq18 95.1 8e-15
seq15 95.1 8e-15
seq13 95.1 8e-15
seq4 91.5 1e-13
seq2 91.5 1e-13
seq7 87.8 1e-12
seq24 86.0 4e-12
seq21 84.2 1e-11
seq8 84.2 1e-11
>seq17
Length=90481686
Score = 118 bits (130), Expect = 7e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| ||
Sbjct 60460178 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 60460119
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || || || || ||||| | || || |||
Sbjct 60460118 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 60460059
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| || |||||||| | ||| ||||| || |||
Sbjct 60460058 CAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTGACTAC 60459999
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|| || ||||| ||||| || | ||| | || || ||
Sbjct 60459998 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 60459961
>seq10
Length=138149186
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||||||||| || || ||||| || || || || |||
Sbjct 22464929 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 22464988
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | | | |||||| ||||| || ||| | || || || |
Sbjct 22464989 GACACCATTGAGAATGTCAGTGC-GAAAATTCAAGACAAGGAGGGTATCCCCCCTGACAA 22465047
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | ||||||||| ||||||| ||||| || | |||||| | || |||||
Sbjct 22465048 GCAGCGTCTGATATTTGCCAGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACAA 22465107
Query 23790 CATACAAAAAGAGTCCAC 23807
| | || ||| || ||||
Sbjct 22465108 CGTCCAGAAACAGCCCAC 22465125
>seq18
Length=83442489
Score = 95.1 bits (104), Expect = 8e-15
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| ||||| || || | ||| ||| | ||||| |
Sbjct 46140504 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACAACCACCCTCAAGGTTGAACCA 46140445
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||| || | |||| |||| || || || || ||||| | || || |||
Sbjct 46140444 TTGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 46140385
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | || ||||| ||||| ||||||||||| | | ||||| | |||
Sbjct 46140384 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGATATACTTTGTCTGGCTAC 46140325
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|| || ||||||||||| || | ||||| || || || |||| || ||
Sbjct 46140324 AATATTCAAAAAGAGTCTACCCTTCATTTTGTGTTGAGACTGCGTGGTGG 46140275
>seq15
Length=107357366
Score = 95.1 bits (104), Expect = 8e-15
Identities = 144/201 (72%), Gaps = 8/201 (4%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||||||||| || || ||||| || || || | ||||
Sbjct 57005113 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCAAGCCCACC 57005172
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| || | ||| | ||||| |||||| ||||| || ||| | || || || ||
Sbjct 57005173 GACACCATTTAGAATGTCAAAAC-CAAAATTCAGGACAAGGAGGGTATCCCACCTGACCA 57005231
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACT---TTAGGCGATTA 23786
|||| | | |||||| | | |||| ||||| || | | |||| | |||| ||
Sbjct 57005232 GCAGCATCTGATATTTTCTAGGAAACGGCTGGAGGATGGCCACACTCTCTCAGGC---TA 57005288
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || |||||||||||
Sbjct 57005289 CAACATCCAGAAAGAGTCCAC 57005309
>seq13
Length=135337776
Score = 95.1 bits (104), Expect = 8e-15
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || ||||| || || || ||||| || || || || |||
Sbjct 126789529 ATGCAAATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 126789470
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | ||| ||| || ||||| ||||| | || || || ||
Sbjct 126789469 GACACCATCGAGAACGTCAAAGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 126789410
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | || || ||||| || ||||| |||||||| | |||||| | || ||||||
Sbjct 126789409 CAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 126789350
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||||||
Sbjct 126789349 ATCCAGAAAGAGTCCAC 126789333
Score = 93.3 bits (102), Expect = 3e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| || || || || || || || || || ||||| ||||| ||||| |||
Sbjct 126789758 AATGCAGATCTTTGTGAAGACTCTGACTGGTAAGACCATCACCCTCGAGGTTGAGCCCAG 126789699
Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | || ||| | || |||| | | || || ||||| | || || || |
Sbjct 126789698 TGACACCATCGAGAATGTCAAGGCAAAGA-TCCAAGATAAGGAAGGCATCCCTCCTGACC 126789640
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
| ||| | || || |||||||| ||||| |||||||| | || || | || ||||
Sbjct 126789639 AGCAGAGGTTGATCTTTGCCGGAAAACAGCTGGAAGATGGTCGTACCCTGTCTGACTACA 126789580
Query 23789 ACATACAAAAAGAGTCCACATTACA 23813
|||| || ||||||||||| || ||
Sbjct 126789579 ACATCCAGAAAGAGTCCACCTTGCA 126789555
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || | || ||||||||||| || || ||||| || || || || ||
Sbjct 116540809 ATGCAGATCTTTATGAACACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGCCCGGT 116540750
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | ||| | |||| | ||||| || || | | ||| || ||
Sbjct 116540749 GACACCATTGAGAATGTCAAAGCTAAAA-TCCAAGACAAGGAGGGCATCCTGCCTGACCA 116540691
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| || | ||||||| |||||||| ||||| || | | || | | || || ||
Sbjct 116540690 GCAGTGTCTGATATTTGTGGGCAAACAGCTGGAGGATGGCCACAGTCTCTCAGACTAGAA 116540631
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||||||
Sbjct 116540630 CATCCAGAAAGAGTCCAC 116540613
>seq4
Length=205426864
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/196 (71%), Gaps = 3/196 (2%)
Strand=Plus/Plus
Query 23613 GCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGA 23672
|||||| || || || ||||||||||| || || |||||||| || || | | | ||
Sbjct 27700148 GCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACTCTTGACGTCAAGCCAAGTGA 27700207
Query 23673 CACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731
||| |||| ||| | ||| | |||| || ||||| || ||| | || || || || |
Sbjct 27700208 CACCATTGAGAATGTGAAAGCCAAAA-TTCAAGACAAGGA-GGTATCCCACCTGACCAGC 27700265
Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791
||| | | ||| |||| |||||||| ||||| || | || ||| | || | |||||
Sbjct 27700266 AGCATCTGATACTTGCTGGCAAACAGCTGGAGGATGGCCGAACTCTCTCAGACTGCAACA 27700325
Query 23792 TACAAAAAGAGTCCAC 23807
| | |||||||||||
Sbjct 27700326 TCCGGAAAGAGTCCAC 27700341
>seq2
Length=114371477
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| |||||||| || || || || ||||| || || || || ||
Sbjct 110579833 AAAATGCAGATCTTCGTGAAAACCCTTACCGGCAAGACCATCACCCTTGAGGTGGAGCCC 110579892
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| ||||| | |||| | || || || || || ||||| | || || ||
Sbjct 110579893 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGAC 110579952
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| || |||||||| | |||||| | || |||
Sbjct 110579953 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 110580012
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || |||||||| ||
Sbjct 110580013 AACATCCAGAAAGAGTCGAC 110580032
>seq7
Length=173848474
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| |||||||| | || || || ||||| ||||| | ||| ||
Sbjct 115442744 AAAATGCAGATTTTCGTGAAAACCCTTATGGAGAAGACCATCACCCTCGAGGCTGAACCC 115442803
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||| || | |||| |||| || || || || ||||| | || || |||
Sbjct 115442804 TTGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 115442863
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| || || ||||||||||| | | | ||||| || |||
Sbjct 115442864 CAGCAAAGACTGATCTTTGCTGGAAAGCAACTGGAAGATGGATGTACTTTGTCTGACTAC 115442923
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
| || ||||| ||||| || | ||| | || || ||
Sbjct 115442924 AGTATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 115442961
>seq24
Length=155392059
Score = 86.0 bits (94), Expect = 4e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||| ||||||||||||| |||||||| | ||| || || ||||| || || ||||| ||
Sbjct 3657818 AAACTGCAGATTTTCGTGAAAACCCTAAGGGGGAAGACCATCACCCTTGAGGTTGAACCC 3657877
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || | | |||| |||| || || || || || || | || || |||
Sbjct 3657878 TCAGATGCGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAGGGAATTCCTCCTGAT 3657937
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | ||| ||||| || | |
Sbjct 3657938 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTGC 3657997
Query 23788 AACATACAAAAAGAG 23802
||||| ||||| |||
Sbjct 3657998 AACATTCAAAAGGAG 3658012
>seq21
Length=62195757
Score = 84.2 bits (92), Expect = 1e-11
Identities = 150/218 (69%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||||||||| || ||||||||||| || || || ||||| ||||| ||||| ||
Sbjct 17453319 AAAATGCAGATTTTTGTGAAAACCCTCACAGGGAAGACCATCACCCTCGAGGTTGAACCC 17453378
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || | || || ||||| | || || |||
Sbjct 17453379 TCGGATACGATAGAAAATATAAAGGCCAAGACCCAGGATAAGGAAGGAATTCCTCCTGAT 17453438
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| | | | || ||||| || || ||||||| || | | | |||| || |||
Sbjct 17453439 CAGTAAAGACTGATCTTTGCTAGC-AAGAACTGGAGGATGGATGTGCTTTGTCTGACTAC 17453497
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| ||||| || | ||| | || || ||
Sbjct 17453498 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 17453535
>seq8
Length=162613886
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||| | | |||||||| ||||| || || ||||| ||| | ||||| ||
Sbjct 160503244 AAAATGCAGATTTCCATAAAAACCCTTACGGGGAAGACCATCACCCTCAAGGTTGAACCC 160503303
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||| | | |||| |||| || || || || ||||| | || || |||
Sbjct 160503304 TTGGATATGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 160503363
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || ||||| ||||| ||||||||||| | | | ||| | || |||
Sbjct 160503364 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTGT--CTGACTAC 160503421
Query 23788 AACATACAAAAAGAG 23802
||||| ||||| |||
Sbjct 160503422 AACATTCAAAAGGAG 160503436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337967276339192
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