Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1332 91.5 1e-13 >seq1332 Length=78221452 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||| |||||||||||||| ||||| |||||||| || || | ||| ||||||||| Sbjct 17416179 TATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTCCCCTTCTTCT 17416238 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 || |||| || || | || ||| || | |||||||| |||||||| || | | Sbjct 17416239 CTGGTGGAGAATCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATCCCAGATTTTC 17416298 Query 97522 ACACC 97526 || || Sbjct 17416299 ACTCC 17416303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346596139412930